Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2110 ATGGCGGCGATCACAAGAATTATCGGGGCCAATTCTGCTTTGCGTCGCCCCCCACTTCTTTCTCCTGCTCTTCTCAGTTTTCGCAGAGGAATTGCTTACAAGCTTTTCGTTGGAGGACTGTCATTTTTTACGACAGAGAAAGGATTATCAGAAGCATTTTGTCAATACGGTCAAGTTATTGAAGCTAAAATTGTGATGGACAAGGTGTCAGAAAGATCAAAAGGGTTTGGGTTTGTCACCTTTGCTTCGGAGGATGAGGCTGAGAATGCCATAACAGGGATGAATGGAAAGCCACTAAATGGACGTGTTATCTTTGTCGATTATGCAAAACCCAAATCCATTACTGGCGATGGAATGCCAATTGCCAGAGGACCTCCTGAACCAGCAACAGACAATTAA 399 0.4411 MAAITRIIGANSALRRPPLLSPALLSFRRGIAYKLFVGGLSFFTTEKGLSEAFCQYGQVIEAKIVMDKVSERSKGFGFVTFASEDEAENAITGMNGKPLNGRVIFVDYAKPKSITGDGMPIARGPPEPATDN 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2110 132 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 28 113 - -
Bisa03g2110 132 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 104 IPR000504 GO:0003723
Bisa03g2110 132 SUPERFAMILY RNA-binding domain, RBD 33 122 IPR035979 GO:0003676
Bisa03g2110 132 Gene3D - 27 115 IPR012677 -
Bisa03g2110 132 SMART rrm1_1 34 107 IPR000504 GO:0003723
Bisa03g2110 132 FunFam RNA-binding family protein 18 127 - -
Bisa03g2110 132 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2110 Bisa-ChrBisa03 30189815 30191430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2110 35 113 Eukaryotic Initiation Factors Gene Family AT1G49760 34.177 6.73e-09 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2110 03 30189815 30191430 Bisa03g2110 03 30189815 30191430 ECH