Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2096 ATGACTTCTTCAGAGTCGACACTTCATCTTGTACTGAGACTTCGTGGGGGTATAATAGAGCCTTTGTTGATGGCTTTGGCTCGTAAATACAATCAAGACAAGATGATTTGCTACAAAAGCCTTGTAGTCAATGGTGTCTTCCATGGGACTTCCTTGACGTGGTGGCTTCTGCATGGTTATGCCTTAGGATGTTATGCTCGTCTACATCCAAGGGCCGTAAACTGCCGGAAGAAGAAATGTGGTCATAGTAATCAGTTGAAAGCTGTGGCACTAAAGCATTTTGTACTTCTTGCAGTTGAGGCCAAAGAAGAAGATCAAGTAAATTATGGCTGGTATCTGGCTAGCCGGAATGTGATTAAGCATGATCAGGATTTATTTCTTAAGGATTTTGAGAGGTTTAACGAAGAAACAAGGGGTGAACAACATGAAGTAGAAACACAAGTAATCATGATAACAGACTTGAAGCTTCCAGTTCTTGTGAAGATGGACAGAGGCATACTGGCACAATAA 510 0.4157 MTSSESTLHLVLRLRGGIIEPLLMALARKYNQDKMICYKSLVVNGVFHGTSLTWWLLHGYALGCYARLHPRAVNCRKKKCGHSNQLKAVALKHFVLLAVEAKEEDQVNYGWYLASRNVIKHDQDLFLKDFERFNEETRGEQHEVETQVIMITDLKLPVLVKMDRGILAQ 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2096 169 Pfam Ribosomal L40e family 64 87 IPR001975 GO:0003735|GO:0005840|GO:0006412
Bisa03g2096 169 Pfam Ribosomal L40e family 19 39 IPR001975 GO:0003735|GO:0005840|GO:0006412
Bisa03g2096 169 Gene3D - 61 91 IPR038587 -
Bisa03g2096 169 SUPERFAMILY Zn-binding ribosomal proteins 63 87 IPR011332 GO:0006412
Bisa03g2096 169 Gene3D - 18 44 IPR038587 -
Bisa03g2096 169 SMART Ribosomal_L40e_3 18 93 IPR001975 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2096 Bisa-ChrBisa03 29918412 29926009 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2096 5 88 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 65.476 3.23e-31 107