Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2083 ATGCTACTTGCGATAAGGCGTTTCAACGCTTTAACCATCTGTCTTCAGCAAATACCCCTAAGAAACGTCGTTTCTTCAAACATTTCAACGGGACAGAAAATAAGCATCGAAGATGAACTAGACTGGTTCTTGCCTGATTCAGTTCAGAAGCGAATCGCGAAGCCTCCCGCGCTTCTTTCTTCTGAAAGCAAAAGAATGTTCTTCGTTCTTCAGAAGCCTCCATTCCCATCTGCATCCCCATTCCATTCTCCATCTCACCATCTAAGACTCAGTCCCGTGCGCTTTTTCCTTCCCCCACAACGAAACCCCAAACTCCCTCCTACTCGAGTTTCCCTCGCAATCTTTAACTCCAGCAAGGGTACTCGCATTAGCCCTTTAAATGGCAAAGCCTCCAATAGTCACTTGCTTTCTCAGACTTCTCAATTCCTCAAACCTTGGCTTCTCTCTGAGCATAAAACCATTCTCTTGGGCTGGCTCTGCAGCGTCATATCTGTTTATTCCCTCTCGAAAATCGTTTCTGAAGCTGGGAAACTTTCTGCTACGATCAACAGCTTAGACGCTTTGAAGTTGCGAGACGAAGGTTTAATATTGGGGGGTTTGATGATTGCCCGCTTGGTTTCAAATTATGGGCAGCAAGCCTTTCTATGGGAAGCTGCACTGAACGCGGTATATAAGCTTAGGGTTCACGTTTTTGACAGAGTTTTGGAGAGAGATTTGGGATATTTTGAAGGCAAGGACGGTGTTTCTGCTGGGGACATTGCGTATCGGATCACTGCGGAAGCTTCGGGTGTTGCTGATACTTTATATGCTGTCCTAAATACCATAATTCCCAGCACTCTGCAGTTATCAGCAATGATGATGCAAATGTTGGTTATAAGTCCTGCCCTTTCTTTGATTTCAGCTGTGGTTATTCCTTGTATGACGCTTGTTGTTGCCTTTCTTGGTCAGAAACTTCGTACAATATCTAGAAAGGCACATCTTAGCATAGCCAATCTCTCAGCATTCCTCAATGAGGTCCTCCCAGCAATTCTTTTTGTTAAAGCAAACAATGCAGAGCTATCTGAGAGTGCCAGGTTTAAGAGGCTGGCTTGGATAGACTTTTTTGAACACCTGAACAAGAGGAGGATGAAGGCAGTCATTCCTCAGATTATACAAGCTATTTATTTTGCTGTCCTTTTTGTTCTTTGTGCTAGTTCGCTGGTGGTTTCAGGAGGATCATTTGATGGCTGTAACTTGGTTTCATTTGTGACATCATTGCTTTTCCTGATTGAACCAATCCAGGATGTAGGAAAAGCATACAATGAATTGAGGCAGGGAGAACCAGCTATTGAACGCCTGATTGATCTGAGCAGGTTCAAAGAAAAGGTGGTTGACAAACTAGATGCCGTTGATTTAGATTATGTTAGAGGGGAGATAAAATTTTGTAATGTCTCATTTAAGTATGATGATGACACGGCACTTGTTATTAATGGACTGAACCTTCACATCAGAGCTGGAGAGATAGTTGCTCTTATGGGTCCCTCTGGTGGAGGGAAGACAACACTTGTAAAACTGTTTCTTCGCCTTTATGATCCTAATTCTGGCTGTATACTGATTGACAATCATAACATCCAAAACATTCGATTGCAAAGTTTGAGAAGACATGTTGGTTTCGTTTCACAAGATATAACGCTTTTTTCAGGGACAGTTGCTGAAAACATTGGTTATAGGGATCTGACAACAAAAATTGACATGGAGAGGATTAAGCATGCAGCACAAATTGCTTATGCTGATGAGTTTATTAGAAAACTTCCAGAAGGGTACAAAACCAATATTGGACCAAGGGGCTCAACTTTAAGTGGAGGCCAAAGGCAAAGGCTAGCTATTGCTAGGGCACTCTATCAAAATTCTTCTATATTAATACTGGATGAGGCAACTTCTGCTTTAGATAGCAAATCTGAATTATCGGTGAGACAAGCTGTAGAGCACTTGATGGAAAATCACACTGTGCTGGTTATTGCCCATCGCATGGAGACAGTTCGGATGGCTAATCGGGTATTTCTCTTGGATAAGGGGAAGTTAGAAGAGTTGCCTCGTTCAGCTATATTGGGTGATCACAAGGACTCGTTGCTACCACCTGGGATTGTGATTTGA 2133 0.4276 MLLAIRRFNALTICLQQIPLRNVVSSNISTGQKISIEDELDWFLPDSVQKRIAKPPALLSSESKRMFFVLQKPPFPSASPFHSPSHHLRLSPVRFFLPPQRNPKLPPTRVSLAIFNSSKGTRISPLNGKASNSHLLSQTSQFLKPWLLSEHKTILLGWLCSVISVYSLSKIVSEAGKLSATINSLDALKLRDEGLILGGLMIARLVSNYGQQAFLWEAALNAVYKLRVHVFDRVLERDLGYFEGKDGVSAGDIAYRITAEASGVADTLYAVLNTIIPSTLQLSAMMMQMLVISPALSLISAVVIPCMTLVVAFLGQKLRTISRKAHLSIANLSAFLNEVLPAILFVKANNAELSESARFKRLAWIDFFEHLNKRRMKAVIPQIIQAIYFAVLFVLCASSLVVSGGSFDGCNLVSFVTSLLFLIEPIQDVGKAYNELRQGEPAIERLIDLSRFKEKVVDKLDAVDLDYVRGEIKFCNVSFKYDDDTALVINGLNLHIRAGEIVALMGPSGGGKTTLVKLFLRLYDPNSGCILIDNHNIQNIRLQSLRRHVGFVSQDITLFSGTVAENIGYRDLTTKIDMERIKHAAQIAYADEFIRKLPEGYKTNIGPRGSTLSGGQRQRLAIARALYQNSSILILDEATSALDSKSELSVRQAVEHLMENHTVLVIAHRMETVRMANRVFLLDKGKLEELPRSAILGDHKDSLLPPGIVI 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2083 710 Gene3D - 462 703 IPR027417 -
Bisa03g2083 710 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 472 709 IPR003439 GO:0005524
Bisa03g2083 710 Gene3D ABC transporter type 1, transmembrane domain 137 450 IPR036640 GO:0005524|GO:0016020
Bisa03g2083 710 SUPERFAMILY ABC transporter transmembrane region 145 451 IPR036640 GO:0005524|GO:0016020
Bisa03g2083 710 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 155 438 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g2083 710 Pfam ABC transporter transmembrane region 195 424 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g2083 710 FunFam ABC transporter related 141 452 - -
Bisa03g2083 710 FunFam ABC transporter ATP-binding protein 465 705 - -
Bisa03g2083 710 SMART AAA_5 498 686 IPR003593 GO:0016887
Bisa03g2083 710 ProSitePatterns ABC transporters family signature. 612 626 IPR017871 GO:0005524|GO:0016887
Bisa03g2083 710 CDD ABC_6TM_exporters 194 446 - -
Bisa03g2083 710 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 690 IPR027417 -
Bisa03g2083 710 Pfam ABC transporter 490 640 IPR003439 GO:0005524
Bisa03g2083 710 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 156 689 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2083 Bisa-ChrBisa03 29738051 29747589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2083 214 707 Calmodulin-binding Proteins AT2G36910 30.695 1.02e-57 211