Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2038 ATGGAGTCGAGCTCAAATGACGAGCACGTTATACTGGTTTGCAAGAATACCGATCAAATTGAAAAGGAGAATGGAAAGGAAGAGATATTTGTTTCAACCACAGATATCCTTAACTGGGATTTCTCGACAATTCTCAGTTTCCACATGATAAAAATTCAGGCACCCCGAAATAGGCTCATCGAGCAATCTTCGTATTTTCGGGGCCTTCTTTGTGGCAGCTTCAGTGAATCATGCTCGGGTTCTATCATTGTTGAGTGGAATGTGGTTGCATTTATGTACATTCTGAGGTATCTGTATGGCTGCCCTTTGGATATTACATCGGATAATTTTCTCTCTCTTTATGAGGGTGCACTTTATTTTGGAGTGGATACACTTCTCTTGAAGTGCAAGACATGGTTTTCTGAGGTAGCATCATCCAAAGGATTTCAATCAACACAAATGCAATTGGAGGATCTAATTCTAATTTGGAAATTTGGTTTGGAGCATGAATACTTTCTGGATAATGCAAATCTGAACTTTGCTAGATTAGTGGTGCTTGCCTCTTTTGCTTCTATAATGTGGGCAATGCATAACAGTCTCTTTGTAAAGATTCCATATAATATGTTGGTGTCTTCCATAGAGCACCCTGACTTGACTATTGACAGTGAGATGCATCTTGCTGATGCATTTTTCCGCTGGCTTGAAAGTGACTTGAAAAATTTGGAGAGTATGAGCAAAGTTGAAGGCAACCGCAACAGAATTATAAAACAAGTATATTATATTCTTTTGGATTTGCCTGTAGCTCCGCAAATTCTTATTAGTTTTGATGTTAGAAATATCTTGATGGATCAAGGTACTTCGATACTTACTCTTATGGCTTTTGTAAGTGGCTTGATGCTTAGTGAAGTTAGTCAAAATATTGATGACAATTCTTTTGATAAGGTTCTTCATTCTTGTAAGTTAGCTGCAGATGCTTTGAACCTTTCAGATTGTCCCCAAATATCGTTGGCGATTCTGCTTCTGTCGGTGATCCCTTTATCTTATCCAGTGGATCTCAGATTAAGAAAGATGATCAAACATTTTTTCAATAACTTTGAACTCCCTTTAAGAGACAAATGTGAATTCCAACCAAGATTGTTGCAAACCTTGTCCTTTGAAGCAGTTCTAGAGGTAGATATCTCAAAGTGTCGAAAATTGCACATTGAAGGTGCCATTGAATGCTTCTGCCAGTCCTTTCCTTCTTTAAGAACATTGAGAGCAGCTTATCTTCTAAACATCAGGACAACCAACTTTCTTCAATTGATGCAGAAGTGCCCTCAGGTTTGTGAAATTAACTTGACTGTTGATATTACGCCATTAATACCAGCATTAGTTTCAGTTGTATCTTCAAGTCCTGCATCAGAGGGAGCTTCTAGTGTTAAATATAAATCAGTGGATGCCTTATCATTTTATGAATCTAAACCACCACTTTCTAACATTACAAGTCTCACATTGGAAGGAAGAACTGATGTCTATGATTTGGATCTTCAGTATATCTCCAAATTTTGTGTTTCACTGTGTCACCTGAATCTTAAAGGATGTGTTTCAGTCACAGATACTGGCATGTCATATCTCATTCACAGATGTACAAAACTTAACTCAATTCTGGTTTGTCATACTTCTTTTGGGGTAAACTCAGTTGAAGCTCTTTCCTCGGCTATTTCTGATAGTGGCAGCTTTGCCTCTCTACATTCAAGGGATATGCATTTGAGTTCTTTAGCCTCTAATCTTCAAACTCTACATATGGGTGGCTGCCAAGATGTAAGTGGGTTATCTCTACTCAAGCTTATGTCTCAAATGCAAGTTCTGAAAAGTTTATGCTTGAGAGGGACTAACTTGGAAGACCAAGCACTTTATAATTTCCCAGGTTCTTCCCTGGAGATGCTTGATGTTTCAAATACCAAGATTTCTGGAGCAGCATTAGCTCATGTTATTAATCGAAATCCAAGTTTAAAGTGTTTGAAAGCAAGAGATTGTAGAAACTTTTTTCATGAAGAACTATATGCCAAGCTGGGAAAAATGTGTAGATTGGAAGAAGCTGAGTTTGGATGGGGTTTTTCATCCCTCTCTTTTAAAGATCTAGAACCTGCACTGATGTCATTACGGACCATCAGTGTAGGCTTAGGTGGAATGTTAGATGAAGATACATTGAGAAAACTACCTGCAAATTGTCCCATGCTAGAAACAATAATACTTTATTTTCAGGTAATATCTGATGCTATTGTGATGAATATAGCTACATCCTTGAGAAACTTGCAAGTGTTAGCTCTGTGCTATTGTTTTGGTGACATATCCATATCAAGTTTCAAACTCTCCATGCAAAATCTAAGACAGCTGAGGCTTGAAAGAGTAACCCCTTGGATGACCAATGACGATTTGGCTATTCTAGCTCAAAACTGCAAAAATTTGGTTGAACTTTCATTATTAGGATGTTCTCTCCTTAACTCAAGGGCTGCTGGGTGGCTGCAGTTCCAAAAGCAGCAGCCCCTGTTTCTGGGTATACTTGAGAAATTTGAGAGTAATTATGTAAAAAATTTTGCTTGGGAGGGGATGGAGTGGGGCCCATTGGGGAGGGAGAAGAAATTGGACAAATTGTGGGACTTTGGAAAATGTGCTGTTCATGCATTTGACCTAAAGTACTTCTCCTCAAATGGATTCTCTTCTCTTCTTGACTGCAAAGCTCTTGAAGATCTCCTGCTGCGTCATAATATGCCATTGCTTCGAAAATTATCACTTGATTTATGTGATGCAAGCGAAGGTGATTTTGACATTCCAGATATACTTCTTGAGCAGCTTGAAGATATCAAGATGCGAGTCCCAAAGATGTGCTTTTCATCTCCCATCCCGCTCCCAAGGGAGTCGTGCAAGGTCTGTGCATGTGGAGACGCTGGTACTCGTGTGGAACAGCAGAGATCTCATCAGAGCAGTGGTGAAGGAAAGGCTTTAATGCATACCATACCACTCAGAACTTCAATTAGTTTGGGTAATCGAAGAAATATGCCAAAAGTAAAGACAAATCGCGTTAAATATCCTGAGGGCTGGGAGTTAATCGAACCTACCCTTCGTGAACTTCAAGCAAAGATGAGGGAAGCTGAGAATGATCCTCATGATGGAAAAAGAAAATGTGAGACGTTGTGGCCTATATTTAAGATTGCACATCAGAAGAGCCGCTACATATTTGACCTCTACCACCGGAGGAAGGAGATTTCTAAGGAATTGTATGAATTTTGTTTAGAACAGGGATATGCTGACCGCAATCTGATAGCAAAATGGAAGAAGCCTGGTTATGAACGTTTATGTTGCTTGAGGTGCATGCAGCCACGGGATCACAACTTTGCCACCACTTGTGTTTGCCGAGTACCCAAGCAACTCAGGGAGGAGAAAGTCATAGAGTGTGTTCATTGTGGCTGCGGGGGCTGTGCAAGTGGGGACTGA 3453 0.3979 MESSSNDEHVILVCKNTDQIEKENGKEEIFVSTTDILNWDFSTILSFHMIKIQAPRNRLIEQSSYFRGLLCGSFSESCSGSIIVEWNVVAFMYILRYLYGCPLDITSDNFLSLYEGALYFGVDTLLLKCKTWFSEVASSKGFQSTQMQLEDLILIWKFGLEHEYFLDNANLNFARLVVLASFASIMWAMHNSLFVKIPYNMLVSSIEHPDLTIDSEMHLADAFFRWLESDLKNLESMSKVEGNRNRIIKQVYYILLDLPVAPQILISFDVRNILMDQGTSILTLMAFVSGLMLSEVSQNIDDNSFDKVLHSCKLAADALNLSDCPQISLAILLLSVIPLSYPVDLRLRKMIKHFFNNFELPLRDKCEFQPRLLQTLSFEAVLEVDISKCRKLHIEGAIECFCQSFPSLRTLRAAYLLNIRTTNFLQLMQKCPQVCEINLTVDITPLIPALVSVVSSSPASEGASSVKYKSVDALSFYESKPPLSNITSLTLEGRTDVYDLDLQYISKFCVSLCHLNLKGCVSVTDTGMSYLIHRCTKLNSILVCHTSFGVNSVEALSSAISDSGSFASLHSRDMHLSSLASNLQTLHMGGCQDVSGLSLLKLMSQMQVLKSLCLRGTNLEDQALYNFPGSSLEMLDVSNTKISGAALAHVINRNPSLKCLKARDCRNFFHEELYAKLGKMCRLEEAEFGWGFSSLSFKDLEPALMSLRTISVGLGGMLDEDTLRKLPANCPMLETIILYFQVISDAIVMNIATSLRNLQVLALCYCFGDISISSFKLSMQNLRQLRLERVTPWMTNDDLAILAQNCKNLVELSLLGCSLLNSRAAGWLQFQKQQPLFLGILEKFESNYVKNFAWEGMEWGPLGREKKLDKLWDFGKCAVHAFDLKYFSSNGFSSLLDCKALEDLLLRHNMPLLRKLSLDLCDASEGDFDIPDILLEQLEDIKMRVPKMCFSSPIPLPRESCKVCACGDAGTRVEQQRSHQSSGEGKALMHTIPLRTSISLGNRRNMPKVKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELYEFCLEQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKQLREEKVIECVHCGCGGCASGD 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2038 1150 PANTHER PROTEIN BUD31-RELATED 1006 1150 IPR001748 GO:0005634
Bisa03g2038 1150 PRINTS G10 protein signature 1138 1147 IPR001748 GO:0005634
Bisa03g2038 1150 PRINTS G10 protein signature 1102 1127 IPR001748 GO:0005634
Bisa03g2038 1150 PRINTS G10 protein signature 1017 1037 IPR001748 GO:0005634
Bisa03g2038 1150 PRINTS G10 protein signature 1076 1101 IPR001748 GO:0005634
Bisa03g2038 1150 PRINTS G10 protein signature 1052 1075 IPR001748 GO:0005634
Bisa03g2038 1150 SUPERFAMILY RNI-like 578 824 - -
Bisa03g2038 1150 Gene3D Potassium Channel Kv1.1; Chain A 39 163 IPR011333 -
Bisa03g2038 1150 Gene3D Ribonuclease Inhibitor 256 562 IPR032675 -
Bisa03g2038 1150 ProSiteProfiles BTB domain profile. 39 107 IPR000210 GO:0005515
Bisa03g2038 1150 CDD BTB_POZ_ZBTB_KLHL-like 56 120 - -
Bisa03g2038 1150 Gene3D Ribonuclease Inhibitor 563 948 IPR032675 -
Bisa03g2038 1150 Pfam G10 protein 1006 1148 IPR001748 GO:0005634
Bisa03g2038 1150 SUPERFAMILY POZ domain 51 132 IPR011333 -
Bisa03g2038 1150 ProSitePatterns G10 protein signature 1. 1105 1127 IPR018230 GO:0005634
Bisa03g2038 1150 SMART LRR_CC_2 779 805 IPR006553 -
Bisa03g2038 1150 SMART LRR_CC_2 580 605 IPR006553 -
Bisa03g2038 1150 SMART LRR_CC_2 509 534 IPR006553 -
Bisa03g2038 1150 SMART LRR_CC_2 730 754 IPR006553 -
Bisa03g2038 1150 SUPERFAMILY RNI-like 319 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2038 Bisa-ChrBisa03 28996972 29024887 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa03g2038 G10 1.3e-60 No_clan