Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2033 ATGCAGAAGCGAAGGGCCGGAAGGAAGAAGTTCCACGAGACTCGCCATCCCACCTTCAAAGGCGTGAGGCAGAGGAACGGCAAGTGGGTCTGCGAGCTCCGACAACCCAACAATAAAACTCGGGTGTGGCTCGGGACATTCGCTCGTCCCGACATGGCAGCCATAGCCTACGACGTTGCTGCTCTGGCCTTCAAGGGAGACTCCGCTTCCTTAAACTTCCCGAACGCGGTTGGGTCCTTACCACGCCTTGATTCGCGTACGTCCTCCATTAGGGACATTCAGTTTGCGGCCATGGAAGCAGCTGAGAAGTACTTCAGCAGTGATGAGATGAAAGAGGTCTCTGGAGGTTCAGCTTTGACTTCGGATTCAGAGGTGGGTGTGGAAGGAGATTCGAGGAGTGTGTGTGTGTATTGGGATGAAGAGGAGGTGTTTAACATGCCGGGGCTGATGAATAGTATGGCAGAAGGGTTGATCATAACACCCCCGGCCTTGCAGACAGGGTTCAATTGGGTTGGTGTGGAAACTACCACCGACTTAACTCTCTGGGGAGATTGA 555 0.5387 MQKRRAGRKKFHETRHPTFKGVRQRNGKWVCELRQPNNKTRVWLGTFARPDMAAIAYDVAALAFKGDSASLNFPNAVGSLPRLDSRTSSIRDIQFAAMEAAEKYFSSDEMKEVSGGSALTSDSEVGVEGDSRSVCVYWDEEEVFNMPGLMNSMAEGLIITPPALQTGFNWVGVETTTDLTLWGD 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2033 184 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Bisa03g2033 184 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Bisa03g2033 184 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Bisa03g2033 184 CDD AP2 19 76 IPR001471 GO:0003700|GO:0006355
Bisa03g2033 184 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Bisa03g2033 184 Pfam AP2 domain 18 66 IPR001471 GO:0003700|GO:0006355
Bisa03g2033 184 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Bisa03g2033 184 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 182 IPR045277 GO:0003700
Bisa03g2033 184 SUPERFAMILY DNA-binding domain 18 75 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2033 Bisa-ChrBisa03 28863431 28863985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2033 3 182 AP2-EREBP Transcription Factor Family AT4G25470 45.946 8.00e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2033 AP2 7.3e-10 CL0081