Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2032 ATGCTGGACACTTACAGGCCCTCTGATGTTGGTGGGCTCAAAGGCATCGAACGGTCAGCGAACGTCCAACACCCACAGGGGATCCCCACGCCTGTCCCATTGCGAGATACTCTCAAACAGTTCACGTGGACGTGCAGTTTAGGGGAAAAAGTAATGTTTAGTTGCAATTACTCTAATAATAGTAATGACGAGAACACGGTCTCCAACCCAGATATCCAACACAAAGCTGGCTTACACCCCGACCCTTCACACGCCGCAGTTCATCGACAACTGCTTCCAACTGCCAACGAATCTCATTCTCAATCTCCCTCCTCGTACTCTCCAACAAACAAAACGATGCATTCCAACACTCACTCTACTTCTACTACCACCACCGCCGTAGCTAGCGGCAGCGGCAGCCAGTCGACTGGGCGTCACCCAGTGTACCGAGGAGTGCGGCGGCGGAGTAGCGGCAAATGGGTGTCTGAAATTCGAGAGCCCAGGAAGCCCAATAGGATTTGGCTAGGCACATTCCCCACCCCTGAAATGGCCGCCATCGCATACGACGTCGCCGCCCTTGCCCTTAAGGGCAGGGACGCTGACCTCAACTTCCCTGACTCCGCCGCCTCCTTTCCCGTTCCGGCGTCCTCCTCTGCCCGCGATATTCAGGTGGCTGCAGCCGCAGCTGCTGCTGCTGCTGGGGCAGCCAGGGATGCTCTTTCCCAACAACAAGGGAATGTCAATGTTAATGTTTCGGAGGGACAAGGGCGAGAAAGGGCGGCTGAGTTTGTGGACGAGGATTTGATCTTTGATTTGCCCAATGTTCTTGTCAATATGGCCCAAGGAATGCTGCTCTCCCCTCCTCCTTTGGACTTCACTGGAGACGATGCTCCCGCATCGGAAGATGATCTCTGGAAATTTCCCTGA 906 0.5464 MLDTYRPSDVGGLKGIERSANVQHPQGIPTPVPLRDTLKQFTWTCSLGEKVMFSCNYSNNSNDENTVSNPDIQHKAGLHPDPSHAAVHRQLLPTANESHSQSPSSYSPTNKTMHSNTHSTSTTTTAVASGSGSQSTGRHPVYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAIAYDVAALALKGRDADLNFPDSAASFPVPASSSARDIQVAAAAAAAAAGAARDALSQQQGNVNVNVSEGQGRERAAEFVDEDLIFDLPNVLVNMAQGMLLSPPPLDFTGDDAPASEDDLWKFP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2032 301 SMART rav1_2 141 204 IPR001471 GO:0003700|GO:0006355
Bisa03g2032 301 SUPERFAMILY DNA-binding domain 141 200 IPR016177 GO:0003677
Bisa03g2032 301 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 97 298 IPR045277 GO:0003700
Bisa03g2032 301 Gene3D AP2/ERF domain 141 199 IPR036955 GO:0003700|GO:0006355
Bisa03g2032 301 MobiDBLite consensus disorder prediction 94 138 - -
Bisa03g2032 301 CDD AP2 142 200 IPR001471 GO:0003700|GO:0006355
Bisa03g2032 301 Pfam AP2 domain 140 190 IPR001471 GO:0003700|GO:0006355
Bisa03g2032 301 ProSiteProfiles AP2/ERF domain profile. 141 198 IPR001471 GO:0003700|GO:0006355
Bisa03g2032 301 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Bisa03g2032 301 PRINTS Ethylene responsive element binding protein signature 180 200 IPR001471 GO:0003700|GO:0006355
Bisa03g2032 301 MobiDBLite consensus disorder prediction 1 34 - -
Bisa03g2032 301 MobiDBLite consensus disorder prediction 94 140 - -
Bisa03g2032 301 FunFam Ethylene-responsive transcription factor 2 140 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2032 Bisa-ChrBisa03 28818510 28820373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2032 130 301 AP2-EREBP Transcription Factor Family AT2G36450 60.870 5.73e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa03g2032 AP2 1.2e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2032 03 28818510 28820373 Bisa07g2324 07 52891532 52892552 CCT
Bisa03g2032 03 28818510 28820373 Bisa03g2032 03 28818510 28820373 ECH