Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2030 ATGGAAATGGAGGATCACCACAATCACAATCACACTCACCATCATCCCCAGCAGTATGGCATGCCCGATCTCCGGCAGCTCCTGAACGGAGGGCCCAGGCCCACCCCCACTCATCTGCCCGCTGCCATACAGCCGCAGCCCACGGCGGAGCTCTTCCAGCCCCACCGCAATCTCACTCCCACCCACCACCCACACTACGACATGATGATGTTTGGTCGCCACGTGGCCGATGTAATGCCTCGTGCCCTCCACGACTTCGCTTCCGATTCCCCCACCGCCGCCGCTGCCCCCACTAATATCACTGTAGCCACTCCGGCCACCACCGCCAGCGCCTCCACTCCTTCGCTCAGTGGCTTGGACGCCGAGACCCCAGGGTGCCTCGGTGGGGATGCCTCCACCGGAAGATGGCCCAGGCAGGAAACACTCACTCTTCTTGAGATCAGATCTCGCCTCGACCCTAAATTCAAAGAGGCCAATCAGAAGGGCCCCTTATGGGATGAAGTCTCTCGGATCATGTCCGAAGAACATGGATACCAACGGAGCGGGAAAAAATGCAGGGAAAAATTCGAGAACTTGTACAAATACTACAAGAAGACGAAGGAAGGCAAGGCGGGAAGACAGGATGGGAAGCACTACAGGTTCTTCCGTCAACTCGAAGCCTTGTACGGAGGAAATGGAACTTCAACCTCATCTGTCCCAGAAGCCAATTATGGTAGCAGCAGTGTTCGGTTTCAGACCCCTTCCCAAGCAAACCAAGACATGCTGTTTCGGTCTCACAATGAGAATCACAATAATCACAAGCATTGCGATAGCCTCAGCCTCACCAACTCCTCTGACTTGGACACGTCATCATCGGACGACAATGACCTCAGCATGGAGAACGAGTCCACGGAGAAGGGGAGGAAGAGGAGGAGTGGAGGCAGCTGGAAGGCGAAGATTAAGGAGTTCATTGACTCCCAGATGAGGAAGCTGATTGAGAAGCAGGAGGCGTGGCTGGATAGGCTAGTGAAGACTCTTGAGCAGAAGGAGAAGGAGAGGGTTTTAAGAGAGGAAGAATGGAGGAGGCAAGAGGCTGCGAGGTTGGAGAGAGAACACAAGTTTTGGGCTAAAGAGAGAGCCTGGATTGAAGCGAGGGACGCCGCTCTAATGGACGCCTTGCAGAAGTTAACAGGAAGAGAGATTAAAGTTCAATCGCCCGAGGGGATCATTGTGGCTAATGAGATTCAAAACCATAGGGAGAACCAGAATGAAGAAGGAAGTGAGATTCTGAATGGGAGTGTTAGGGGAAGTGAGAGCTGGCCGAAGTCTGAGATCACAAGGCTTGTAGAGTTGAGGGCTGAGATGGAGTCCGGGTTTCAGCAAAGTGGGTGTTCGGTAGAGGTTATGTGGGAGGAAATAGCCAACAAGATGGCTTGTTTTGGCTACGAGAGGACGGCTTTGATGTGTAAAGACAAGTGGGAAAGTATCACAAACTATTCAGACGGTAAAGATGGGAATAACAAGAAGCGAAAGGAGAAGTCAAGAAGCTGTTACTACTTCGACAACATTAACATTAATGACCAATCATCCTTGTATAACCAAGCAAGTGCTACTGCTTCCTACTGTGACATCAACGAACAACGCCACCATAACGAGAGGCTACAAACAACAAATGATGGCTCCTCTCCTTCGAATTCCAATGTTGGAAATGCAGTCACGGCTGACGTCAGCTGCTTTCCCTTCTTCATTAGTGCCGAGGGGGAAAATCTGTGGGAAAACTACGGCTTGAAGCTCAATAAAGGAAACCAAAACCAGTGA 1797 0.5153 MEMEDHHNHNHTHHHPQQYGMPDLRQLLNGGPRPTPTHLPAAIQPQPTAELFQPHRNLTPTHHPHYDMMMFGRHVADVMPRALHDFASDSPTAAAAPTNITVATPATTASASTPSLSGLDAETPGCLGGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGGNGTSTSSVPEANYGSSSVRFQTPSQANQDMLFRSHNENHNNHKHCDSLSLTNSSDLDTSSSDDNDLSMENESTEKGRKRRSGGSWKAKIKEFIDSQMRKLIEKQEAWLDRLVKTLEQKEKERVLREEEWRRQEAARLEREHKFWAKERAWIEARDAALMDALQKLTGREIKVQSPEGIIVANEIQNHRENQNEEGSEILNGSVRGSESWPKSEITRLVELRAEMESGFQQSGCSVEVMWEEIANKMACFGYERTALMCKDKWESITNYSDGKDGNNKKRKEKSRSCYYFDNININDQSSLYNQASATASYCDINEQRHHNERLQTTNDGSSPSNSNVGNAVTADVSCFPFFISAEGENLWENYGLKLNKGNQNQ 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2030 598 ProSiteProfiles Myb-like domain profile. 128 193 IPR001005 -
Bisa03g2030 598 CDD GT1 433 492 - -
Bisa03g2030 598 Pfam Myb/SANT-like DNA-binding domain 135 221 IPR044822 -
Bisa03g2030 598 Pfam Myb/SANT-like DNA-binding domain 431 516 IPR044822 -
Bisa03g2030 598 Coils Coil 325 352 - -
Bisa03g2030 598 MobiDBLite consensus disorder prediction 269 290 - -
Bisa03g2030 598 ProSiteProfiles Myb-like domain profile. 432 490 IPR001005 -
Bisa03g2030 598 PANTHER FI21293P1 103 553 - -
Bisa03g2030 598 FunFam trihelix transcription factor PTL-like 136 198 - -
Bisa03g2030 598 SMART sant 132 195 IPR001005 -
Bisa03g2030 598 SMART sant 429 492 IPR001005 -
Bisa03g2030 598 Gene3D - 433 493 - -
Bisa03g2030 598 Gene3D - 136 198 - -
Bisa03g2030 598 MobiDBLite consensus disorder prediction 1 36 - -
Bisa03g2030 598 FunFam Trihelix transcription factor GT-2 433 495 - -
Bisa03g2030 598 MobiDBLite consensus disorder prediction 292 306 - -
Bisa03g2030 598 MobiDBLite consensus disorder prediction 260 306 - -
Bisa03g2030 598 CDD GT1 135 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2030 Bisa-ChrBisa03 28754143 28757063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2030 14 593 Trihelix Transcription Factor Family AT5G03680 46.053 2.16e-148 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa03g2030 Myb_DNA-bind_4 9.5e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g2030 03 28754143 28757063 Bisa03g2030 03 28754143 28757063 ECH