Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2016 ATGAAGCGTCAAGTAGTAGTAGTGAGGAGATCAGAAGGAGGAAGAGGGTCAAGCAGAAGTGTGAGATATGGAGAGTGTCAGAAGAATCATGCGGCTAATGCCGGAGGATACGCCGTGGACGGCTGCCGGGAGTTCATGGCCGGCGGGGAGGAAGGCACAAGCGCTGCTCTTACTTGTGCTGCTTGTGGCTGTCACAGAAACTTCCACAAAAGATTGTTAGGCACTACTGATGACTCCTCGTCGCCTGATCAGAATTCCAATGGGGTTTGA 270 0.5222 MKRQVVVVRRSEGGRGSSRSVRYGECQKNHAANAGGYAVDGCREFMAGGEEGTSAALTCAACGCHRNFHKRLLGTTDDSSSPDQNSNGV 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2016 89 MobiDBLite consensus disorder prediction 1 21 - -
Bisa03g2016 89 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 17 73 - -
Bisa03g2016 89 Pfam ZF-HD protein dimerisation region 21 71 IPR006456 -
Bisa03g2016 89 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 23 72 IPR006456 -
Bisa03g2016 89 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 22 71 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2016 Bisa-ChrBisa03 28590402 28590671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2016 1 87 Zinc finger-homeobox gene family AT3G28917 56.000 2.18e-30 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa03g2016 ZF-HD_dimer 5.4e-29 No_clan