Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2014 ATGGGAAGACCGCCTTGTTGTGATAAAGAAGGGGTGAAGAAAGGACCTTGGACTCCCGAAGAAGATATCATATTGGTCTCTTACATACAGCAACATGGTCCTGGCAATTGGAGGGCTGTTCCAACTAATGCAGGGTTGTCAAGGTGCAGCAAGAGTTGCAGACTTAGATGGACTAATTACCTAAAGCCAGGAATCAAACGTGGTAACTTCACAGACCAGGAGGAGAAGATGATAATCCATCTTCAAGCTCTTCTGGGCAATAGGTGGGCAACCATAGCATCGTACCTTCCACAGAGAACAGACAACGACATAAAGAACTATTGGAACACCCACTTGAAAAAGAAGCTCAAGAAACTGGGTGAATTAGGCAGCTTAGGAGATGGGTGTTCGGCTTCACAATCAATGCGTCGAGGGCAGTGGGAAAGAAGGCTCCAAACCGACATCCACATGGCCAAGAGAGCTCTCAGCGAGGCTCTGTCCCCAGATCAGAAGCCCTCTTCCTTATCTGAAACATCCGATTCAAACCCCTCTAAACCAACCCACAACATAAGCTACGCGTCGAGTGTAGAAAACATAGCTCGATTGTTAAAGGGATGGATGAAAAACCTACCAAAGAAAACTTCCACCACAAGCTCTGCTATCACCCACAACTCTTTCAACAACTGGGACACTACGTCCAGCGAAGGAATCACCACAAGCAACAGCGTTGGACTGTCTGAGACTTTTGAATCCTTGTTTGGGTTTGAGTCTTTGGATTGTTCTTCAAATTCTAATCTTTCCACTGAGGCTACCACTTTCCAAGAGGAAAGCAAGCCGGAGATTAGTGGGGCAGAGACCGAGACGCCCTTCTATTTGCTTGAGAAGTGGCTTCTTGATGACGCTGCTTGTCAGGACAAACTTAGCTATGCTAATATGATTACATCGGTTGAAGTTGCAGATTCCCATTTTTTATAA 954 0.4591 MGRPPCCDKEGVKKGPWTPEEDIILVSYIQQHGPGNWRAVPTNAGLSRCSKSCRLRWTNYLKPGIKRGNFTDQEEKMIIHLQALLGNRWATIASYLPQRTDNDIKNYWNTHLKKKLKKLGELGSLGDGCSASQSMRRGQWERRLQTDIHMAKRALSEALSPDQKPSSLSETSDSNPSKPTHNISYASSVENIARLLKGWMKNLPKKTSTTSSAITHNSFNNWDTTSSEGITTSNSVGLSETFESLFGFESLDCSSNSNLSTEATTFQEESKPEISGAETETPFYLLEKWLLDDAACQDKLSYANMITSVEVADSHFL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2014 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa03g2014 317 CDD SANT 16 61 IPR001005 -
Bisa03g2014 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa03g2014 317 MobiDBLite consensus disorder prediction 156 184 - -
Bisa03g2014 317 FunFam MYB-related transcription factor 13 66 - -
Bisa03g2014 317 Gene3D - 68 125 - -
Bisa03g2014 317 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa03g2014 317 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa03g2014 317 SMART sant 66 114 IPR001005 -
Bisa03g2014 317 SMART sant 13 63 IPR001005 -
Bisa03g2014 317 CDD SANT 69 111 IPR001005 -
Bisa03g2014 317 Gene3D - 13 66 - -
Bisa03g2014 317 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa03g2014 317 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa03g2014 317 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 227 - -
Bisa03g2014 317 MobiDBLite consensus disorder prediction 160 184 - -
Bisa03g2014 317 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2014 Bisa-ChrBisa03 28561913 28563075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2014 1 295 MYB Transcription Factor Family AT5G62470 51.724 2.54e-106 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g2014 Myb_DNA-binding 8.6e-16 CL0123