Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2012 ATGGTGCAACGGCTCACGTATCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACAGGATTGTCAAAACGCCTGGTGGCAAGTTGGTGTATCAGACTACAAAGAAGAGAGCAAGCGGTCCAAAGTGTCCCGTTACTGGAAAGAGGATTCAAGGGATTCCACACTTGAGACCTGCTGAATACAAGAGGACTAGATTGTCTAGGAACCGCAGGACAGTCAACCGGCCCTATGGAGGTGTATTATCTGGAGGAGCTGTTAGAGAAAGGATAATCCGGGCTTTCTTGGTTGAAGAGCAAAAGATTGTTAAAAAAGTTTTGAAGATCCAGAAGGCAAAAGAAAAGCAGGCATCAAGGGCAAAAGTTGATCCTTTTTTATCTTTTGTGATACTTGCCTACTTTATTATTTCCCTCAACAAATGGTCCTTTGAAGAGCTGTATTCCTTTGGCGTTCACCGTTCTCTTGGGCGTCTGATCCAGGAATTGGCACTGATATCGTTCAAGGTGCATCAAATATTTCTGGAAACTGGAGACCATTTAGTAGAAATGGAGTAA 555 0.4432 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRTRLSRNRRTVNRPYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRAKVDPFLSFVILAYFIISLNKWSFEELYSFGVHRSLGRLIQELALISFKVHQIFLETGDHLVEME 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2012 184 PRINTS Ribosomal protein L34 signature 26 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bisa03g2012 184 PRINTS Ribosomal protein L34 signature 44 54 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bisa03g2012 184 PRINTS Ribosomal protein L34 signature 13 26 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bisa03g2012 184 PRINTS Ribosomal protein L34 signature 66 88 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bisa03g2012 184 PANTHER 60S RIBOSOMAL PROTEIN L34 1 116 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bisa03g2012 184 ProSitePatterns Ribosomal protein L34e signature. 15 28 IPR018065 -
Bisa03g2012 184 Gene3D - 1 38 - -
Bisa03g2012 184 Pfam Ribosomal protein L34e 1 96 IPR008195 GO:0003735|GO:0005840|GO:0006412
Bisa03g2012 184 Gene3D - 39 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2012 Bisa-ChrBisa03 28551592 28555170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2012 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.756 1.63e-74 218