Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2006 ATGTATGCTCGAAGTTTATCGTCGCATTCAAAGTTTGATGTTAATACCGTGTTTTGTGGGGTTCTAATGGCGGAAGCTGCAGAGCCTAAAGCATTGCCTGAAGCAGAGAAGAAGAAGGAGCAGAGTGTCCCCTTTTACCAGCTATTCTCTTTCGCAGACAAGTATGACTGGTTGCTCATGATCTTGGGGAGCTTAGGCGCCGTCGTTCATGGCTCTTCCATGCCCGTTTTCTTCCTTCTTTTCGGTGAAATGATTAATGGGTTTGGCAAGAACCAGATGGATTTGAACAAGATGACGGAAGAAGTATCAAAGTATGCTCTATATTTCGTGTACCTGGGTCTTGTCGTTTGCTTATCATCTTATGCGGAAATTGCATGCTGGATGTATACTGGGGAGAGACAAGTGAGCACGTTGAGGAAGAAGTACTTGGAGGCAGTGCTGAAACAGGACGTTGGGTTCTTCGACACAGATGCTAGAACAGGGGACATAGTTTTCAGTGTCTCCACCGATACTCTGCTTGTTCAAGATGCTATAAGCGAGAAGGTAGGGAACTTCATACATTATCTCTCGACTTTTCTGGCGGGATTAGTGGTCGGATTTGTGTCTGCATGGAGGCTGGCGCTTCTGAGTGTGGCGGTGATCCCAGGCATTGCTTTCGCCGGAGGATTGTATGCTTACACCCTCACAGGCCTCACCTCCAAGAGTCGTCAATCTTATGCCAATGCCGGCATAATCGCCGAGCAGGCCATTGCTCAAGTTCGAACAGTTTACTCGTACGTTGGAGAGAGCAAGGCCCTTAATTCCTATTCTGATGCGATACAAAACACACTAAAACTTGGATATAAAGCTGGAATGGCCAAGGGTTTGGGCTTAGGATGTACATATGGGATAGCTTGCATGTCCTGGGCATTAGTCTTCTGGTATGCTGGTGTCTTTATCAGAAATGGACAGACCGATGGAGGCAAGGCCTTTACTGCAATTTTCTCTGCAATTGTAGGTGGCATGAGTTTGGGGCAGTCGTTTTCAAACTTAGGGGCGTTCAGTAAAGGCAAAGCTGCTGGATACAAGTTGATGGAGATAATCAGGCAAAAGCCCACTATAGTGGAAGACCCTTCAGATGGGAAGTGCTTGGATGAGGTTAATGGGAATATCGAGTTAAAAAATGTTACTTTCAGCTATCCATCAAGGCCAGATGTCATCGTCTTTCGAAATTTCTCGATCTTTTTCCCTGCCGGAAAAACTGTCGCCGTCGTCGGCGGTAGTGGGTCGGGAAAGAGCACTGTCGTTTCCTTGATAGAGAGGTTCTATGATCCTAATGAAGGGCAGGTTTTACTAGATAACGTAGACATAAAGACACTACAATTGAAATGGTTACGTGGTCAGATTGGGTTGGTGAATCAAGAACCTGCACTCTTTGCAACTACCATACTCGAGAATATACTCTATGGAAAACCCGATGCAACAATGGCTGAAGTAGAAGCAGCTGCTTCTGCTGCCAATGCTCATAGCTTTATCACTTTGCTTCCAAATGGCTATAACACTCAAGTGGGAGAGCGAGGAGTCCAACTATCAGGTGGCCAAAAACAGAGGATAGCAATAGCCAGAGCAATGTTGAAGAACCCAAAGATCCTTCTTTTAGATGAAGCAACCAGTGCTCTCGACGCAGGCTCTGAAAGTATAGTGCAAGAAGCACTAGACCGTCTCATGGTTGGACGTACAACTGTAGTTGTCGCCCATCGTCTGTCAACTATCAGGAACGTAGACTCCATTGCTGTGATCCAACAAGGCCAAGTAGTTGAGACAGGGACGCACGAAGAACTAATTGCCAAGGCAGGCACCTATGCTTCCTTAATTCGATTCCAAGAAATGGTGGGAAACAGAGACTTGTCCAACCCGTCCACTCGCCGCACTCGCTCGTCGCGGTTGAGCCACTCGCTTTCGACCAAGTCTTTGAGCCTCCGGTCCGGGAGCTTGAGGAACTTGAGCTACCAGTACAGCACTGGAGCCGACGGTCGGATTGAGATGATATCAAATGCTGAAACAGACAAGAAGAATCCTGCTCCTCAGGGGTACTTCTTCCGCCTCCTCAAGTTGAATGCCCCTGAATGGCCTTACTCAATCATGGGAGCTGTAGGGTCTGTTCTTTCAGGGTTCATTGGCCCGACTTTTGCCATTGTTATGAGCAATATGATTGAGGTGTTTTACTACAAGAACTACGCCTCCATGGAGAAGAAAACTAAGGAGTTTGTTTTCATATACATCGGAGCTGGCCTTTATGCCGTTGGTGCATATCTCATACAGCACTACTTTTTTAGTATCATGGGAGAAAATCTCACTACAAGGGTTCGAAGAATGATGCTTGCAGCAATATTAAGGAATGAAGTTGGGTGGTTCGATGAGGAGGAGCACAATTCAAGCCTGGTTGCAGCTCGGCTTGCCACTGATGCTGCTGATGTGAAGTCTGCAATAGCTGAGAGGATCTCGGTGATTTTGCAGAACATGACGTCTCTTTTAACTTCATTCATAGTTGCTTTCATTGTGGAATGGAGGGTTTCTTTGCTCATCCTCGCAACCTTCCCTCTTCTTGTTCTAGCTAATTTCGCTCAGCAACTATCTCTGAAAGGGTTTGCTGGAGACACAGCCAAGGCACATGCAAAGACGAGTATGATTGCAGGGGAAGGAGTAAGCAACATCCGAACCGTCGCTGCCTTCAATGCTCAAAAGAAGATCTTGTCTCTCTTTTGCCACGAGCTTCGTCTTCCGCAGCGCCGGAGCCTGCGCCGGAGTCAAACTTCCGGACTCCTCTTTGGTCTCTCCCAGCTTGCTCTCTACGCTTCTGAAGCTCTCATTCTCTGGTACGGTGCCCATCTGGTGAGCAAAGGCGCCTCCACCTTCTCCAAGGTCATCAAAGTTTTCGTAGTCCTGGTCATCACAGCTAATTCAGTTGCAGAAACCGTAAGCCTGGCTCCAGAGATCATCAGAGGTGGTGAAGCCGTTGGTTCTGTATTCTCCATACTGGACCGGTCAACAAAGATCGACCCGGATGATCCTGATGCCGAAGCAGTTGAATCCATTCGCGGCGAAATTGAACTCAGACATGTGGACTTTGCCTACCCTTCACGCCCTGATGTGATGGTGTTCAAGGATCTTAACCTTAGAATCCGAGCAGGACAGAGCCAGGCTCTAGTAGGAGCAAGTGGGTCAGGCAAAAGCTCAGTGATCGCATTGATTGAGCGTTTTTACGACCCCGTTGCAGGCAAAGTGATGATAGATGGAAAGGACATTAGGAGATTGAATCTGAAGTCACTGAGGCTCAAGATTGGGTTAGTCCAACAAGAGCCAGCCCTCTTCGCAGCAAGCATATTGGACAACATAGCCTACGGCAAAGAAGGCGCCACTGAAGCAGAAGTCATAGAAGCCGCACGTGCAGCGAACGTGCATGCATTCGTCAGCAGTTTGCCGGAGGGTTACAAGACTCCAGTTGGTGAGAGAGGGGTTCAGCTCTCTGGTGGTCAAAAACAGAGAATTGCCATAGCCAGGGCTGTTCTGAAAGACCCTGCGATACTTCTGCTAGACGAGGCCACGAGTGCACTTGATGCTGAGTCAGAGTGTGTGCTACAAGAAGCGTTGGAGAGGCTCATGAGGGGTCGAACAACTGTGCTTGTGGCTCACCGTTTGTCGACCATAAGAGGAGTGGACTGCATCGGAGTGGTGCAAGATGGGCGCATTGTGGAGCAAGGCAGCCACGCCGAGCTGGTGAGCCGACCGGAGGGGGCGTATTCCAGGCTTTTGCGGCTACAACACCATCACATATGA 3816 0.4843 MYARSLSSHSKFDVNTVFCGVLMAEAAEPKALPEAEKKKEQSVPFYQLFSFADKYDWLLMILGSLGAVVHGSSMPVFFLLFGEMINGFGKNQMDLNKMTEEVSKYALYFVYLGLVVCLSSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRQSYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIRQKPTIVEDPSDGKCLDEVNGNIELKNVTFSYPSRPDVIVFRNFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLKWLRGQIGLVNQEPALFATTILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDLSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPQGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYKNYASMEKKTKEFVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQKKILSLFCHELRLPQRRSLRRSQTSGLLFGLSQLALYASEALILWYGAHLVSKGASTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRSTKIDPDDPDAEAVESIRGEIELRHVDFAYPSRPDVMVFKDLNLRIRAGQSQALVGASGSGKSSVIALIERFYDPVAGKVMIDGKDIRRLNLKSLRLKIGLVQQEPALFAASILDNIAYGKEGATEAEVIEAARAANVHAFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDCIGVVQDGRIVEQGSHAELVSRPEGAYSRLLRLQHHHI 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2006 1271 Pfam ABC transporter transmembrane region 60 334 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g2006 1271 Pfam ABC transporter transmembrane region 707 978 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g2006 1271 CDD ABC_MTABC3_MDL1_MDL2 1029 1267 - -
Bisa03g2006 1271 CDD ABC_6TM_Pgp_ABCB1_D2_like 696 1012 - -
Bisa03g2006 1271 Gene3D ABC transporter type 1, transmembrane domain 996 1018 IPR036640 GO:0005524|GO:0016020
Bisa03g2006 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 707 994 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g2006 1271 Gene3D - 374 622 IPR027417 -
Bisa03g2006 1271 Gene3D - 1019 1268 IPR027417 -
Bisa03g2006 1271 SMART AAA_5 1056 1242 IPR003593 GO:0016887
Bisa03g2006 1271 SMART AAA_5 411 603 IPR003593 GO:0016887
Bisa03g2006 1271 SUPERFAMILY ABC transporter transmembrane region 48 371 IPR036640 GO:0005524|GO:0016020
Bisa03g2006 1271 Gene3D ABC transporter type 1, transmembrane domain 47 995 IPR036640 GO:0005524|GO:0016020
Bisa03g2006 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 384 620 IPR003439 GO:0005524
Bisa03g2006 1271 FunFam ABC transporter B family member 1 686 995 - -
Bisa03g2006 1271 FunFam ABC transporter B family member 1 47 383 - -
Bisa03g2006 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 375 621 IPR027417 -
Bisa03g2006 1271 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1031 1265 IPR003439 GO:0005524
Bisa03g2006 1271 ProSitePatterns ABC transporters family signature. 1168 1182 IPR017871 GO:0005524|GO:0016887
Bisa03g2006 1271 CDD ABC_MTABC3_MDL1_MDL2 384 621 - -
Bisa03g2006 1271 ProSitePatterns ABC transporters family signature. 523 537 IPR017871 GO:0005524|GO:0016887
Bisa03g2006 1271 FunFam ABC transporter B family member 19 374 622 - -
Bisa03g2006 1271 CDD ABC_6TM_Pgp_ABCB1_D1_like 60 357 - -
Bisa03g2006 1271 FunFam ABC transporter B family member 19 1019 1268 - -
Bisa03g2006 1271 PANTHER ABC TRANSPORTER B FAMILY 26 719 IPR039421 -
Bisa03g2006 1271 Pfam ABC transporter 403 551 IPR003439 GO:0005524
Bisa03g2006 1271 Pfam ABC transporter 1048 1196 IPR003439 GO:0005524
Bisa03g2006 1271 MobiDBLite consensus disorder prediction 628 648 - -
Bisa03g2006 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1019 1267 IPR027417 -
Bisa03g2006 1271 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 61 349 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g2006 1271 SUPERFAMILY ABC transporter transmembrane region 688 1014 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2006 Bisa-ChrBisa03 28441275 28449225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2006 24 1267 Calmodulin-binding Proteins AT2G36910 53.956 0.0 1363