Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g2004 ATGTCGAGCAGAAGGTCGAGGCAGCAGTCGTCATCAGGGTCTACGAGTATCTCCGATGACCAAATCATTGAACTTGTGTCCAAGTTGCGTCAACTTGTTCCTGAGATTCGCGATAGGCGCCGCTCTGACAAGGTATCTGCATCTAAGGTGCTACAAGAGACATGCAACTACATCAGAAGCTTAAACAGAGAAGTGGATGATTTAAGCCAGCGACTGTCCCAATTGTTGGCCACAATTGATGCTGATAGTCCTGAAGCTGCTATCATTAGGAGCTTAATTAATCCATAA 288 0.4583 MSSRRSRQQSSSGSTSISDDQIIELVSKLRQLVPEIRDRRRSDKVSASKVLQETCNYIRSLNREVDDLSQRLSQLLATIDADSPEAAIIRSLINP 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g2004 95 CDD bHLH_AtPRE_like 19 78 - -
Bisa03g2004 95 FunFam Transcription factor ILI6 5 90 - -
Bisa03g2004 95 Pfam Helix-loop-helix DNA-binding domain 24 61 IPR011598 GO:0046983
Bisa03g2004 95 Coils Coil 51 78 - -
Bisa03g2004 95 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 81 IPR036638 GO:0046983
Bisa03g2004 95 Gene3D - 18 86 IPR036638 GO:0046983
Bisa03g2004 95 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 61 IPR011598 GO:0046983
Bisa03g2004 95 PANTHER TRANSCRIPTION FACTOR PRE 1 93 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g2004 Bisa-ChrBisa03 28417095 28417988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g2004 17 93 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 77.922 1.18e-38 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa03g2004 HLH 7.1e-05 No_clan