Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1998 ATGGAGCTAGGTGCAGACTCTGATATAACTAGTGCATTTGAATTTGATGTGCGAAAATTAAAAGAAGCTAAGAAACCTGACAACAAAACTAAGGTTTTGGGATGTTGGATGAACTGGAGATTCATTGGAAGATGCTTATCCTCCGAAACTAAATCTAAGAAAAAGACCAGCAGAGGCAAATCAGTTGCTCGATTTTTGTCATTTTCAACCAACAGCAATTCAGGAACAGGACCATCGACCTCGAACATGAATGAGGAAATGAATATTTCTTCCAATCTTCGAAGGTTTACATTTAATGAGCTTAAGGAAGTTACAAGGAACTTCAGACCTGAAAGTATTCTTGGCCAGGGAGGCTTTGGCTGTGTTTTCAAAGGTTGGCTCAGTCAGAATATGATGTCTCATGCAAAACCTGGCATGGGGATTCCTGTTGCTGTGAAAACTCTGAACCATGATGGACTTCAGGGCCATAAAGAATGGCTTGCTGAAGTTAACTACCTCGGTGAACTCCATCACCCCAATCTGGTTAAACTAATAGGATACTGCAGCGAAGGTGACCAGAGGCTTCTGGTATATGAATTTATGCCTCGAGGAAGCTTGGAAAACCATCTTTTTCGAAGACATCTGCCTCTCCCATGGTCCATTAGAATGAAAATCGTGTTCGGTGCTGCAAAGGGACTAGCCTTCCTTCACGAAGAAGCTGACAGGACGGTGATTTTTCGGGATTTTAAAACATCGAATATCCTGCTGGATTCGGACTACAATGCAAAACTTTCTGATTTTGGGCTAGCCAAGGACGGTCCAGAGGGGGATCGTACTCATGTGTCGACTCGAGTGATGGGAACTTATGGCTATGCAGCTCCTGAATATGTGATGACTGGACATCTCACTGCAAAGAGTGATGTGTACAGCTTCGGAGTAGTGCTTCTTGAACTGTTGACAGGCAGAAAGGCCATGGACAGAAGCCGGCCTCCTTGCGAGCAAAGCCTGGTGGAATGGGCGAGAACGCTATTGGTGGATAAGAGAAGATACTACAGGCTCATCGATCCTCAGCTCCACGGACGTTTCTCAATGAGAGGTGCTGAGAGAGCCATTCAGATAGCTTGTCGCTGCCTTAGCCGCGACCCCAAAGCAAGGCCAGCCATGACTGAAGTTGTTGAGGCCTTACGGCCTGTGCTGGACTTCACCGACATGGTCCTCTCGTCACCCTCCTTCCAGGCTATCCAAGCTAGCAAGAATGCTAAAAGGACAGAGTCTAGAACTGGCTCTTCAAGGAGTGTACCCTCCTCTCCATTCCGCTCTAATTATGCTCTTCCCTCTCCCAGTCCTAACAATGGGAGACCCTGA 1344 0.4643 MELGADSDITSAFEFDVRKLKEAKKPDNKTKVLGCWMNWRFIGRCLSSETKSKKKTSRGKSVARFLSFSTNSNSGTGPSTSNMNEEMNISSNLRRFTFNELKEVTRNFRPESILGQGGFGCVFKGWLSQNMMSHAKPGMGIPVAVKTLNHDGLQGHKEWLAEVNYLGELHHPNLVKLIGYCSEGDQRLLVYEFMPRGSLENHLFRRHLPLPWSIRMKIVFGAAKGLAFLHEEADRTVIFRDFKTSNILLDSDYNAKLSDFGLAKDGPEGDRTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRKAMDRSRPPCEQSLVEWARTLLVDKRRYYRLIDPQLHGRFSMRGAERAIQIACRCLSRDPKARPAMTEVVEALRPVLDFTDMVLSSPSFQAIQASKNAKRTESRTGSSRSVPSSPFRSNYALPSPSPNNGRP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1998 447 MobiDBLite consensus disorder prediction 408 447 - -
Bisa03g1998 447 SUPERFAMILY Protein kinase-like (PK-like) 89 408 IPR011009 -
Bisa03g1998 447 ProSitePatterns Protein kinases ATP-binding region signature. 114 146 IPR017441 GO:0005524
Bisa03g1998 447 Pfam Protein tyrosine and serine/threonine kinase 112 388 IPR001245 GO:0004672|GO:0006468
Bisa03g1998 447 FunFam Serine/threonine-protein kinase BIK1 75 193 - -
Bisa03g1998 447 PANTHER OS01G0588500 PROTEIN-RELATED 61 390 - -
Bisa03g1998 447 Gene3D Phosphorylase Kinase; domain 1 87 193 - -
Bisa03g1998 447 ProSiteProfiles Protein kinase domain profile. 108 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1998 447 CDD STKc_IRAK 114 388 - -
Bisa03g1998 447 Gene3D Transferase(Phosphotransferase) domain 1 194 402 - -
Bisa03g1998 447 FunFam Probable serine/threonine-protein kinase PBL8 194 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1998 Bisa-ChrBisa03 28332834 28337254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1998 82 404 Glycoside Hydrolase AT3G07070 50.915 2.00e-112 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa03g1998 PK_Tyr_Ser-Thr 1.8e-46 CL0016