Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1984 ATGGAGATGATAATGATAAAGAGTGAAGAGAGCAAAAAAAGAAGCCAAATGTGCATGTCAGAAGGTGAGTTCCAAGGAACACGATGTGTCAAGAGACGACGAAGAGAGGCTTCTGTAGCTGCACTTAATTGCGACGACAATCAAAGTGACCAGAAGCAGCAGATACCGCAGCTACAAGTTGATCAGAATTCTAGTACCAACACTGTAAAGAGGAGTTCAAGGTTTCGTGGTGTCAGCAGACATAGGTGGACAGGTCGATTTGAAGCTCACTTGTGGGACAAGCTCTCTTGGAACGTGACACAGAAGAAGAAAGGGAAGCAAGGAGCGTACGATGAAGAAGAATCTGCAGCAAGGGCATACGATTTAGCTGCACTTAAGTACTGGGGAACATCAACTTTCACTAATTTTCCGATATCTGATTACAAGAAAGAGATAGAGACCATGCAAACTATGACCAAAGAGGAGTACTTGGCCACTTTAAGAAGAAAAAGCAGTGGCTTTTCAAGAGGGGTATCGAAGTATAGGGGAGTTGCAAGGCACCACCATAATGGTAGATGGGAAGCAAGGATTGGGAGGGTTTTTGGAAACAAATATCTCTATCTTGGCACTTACAGCACCCAAGAGGAAGCTGCTCGTGCTTATGACATAGCTGCCATTGAGTACAGGGGGATCCATGCTGTAACAAATTTTGACCTGAGTACTTACATAAGATGGTTGAAGCCTGCACGAGAGACCATTCTAGAAGCAGCAGTTGAATCACAGGCAGTACCCGAGGCTCATACAGAGGCATGTCCATCTATCCATACCCAAATTGAGGAGAACAAATCCTTGGCCCTTCAAAGTAATTCTCTCACAGATTACCTGAATTGCCCTCAAATGCAAGATGTCTTTGAGAACAAAACCCATCTAATCTCGAGCAATAAGGCGTCTTCTCCAAGTGCACTTGGCCTTCTTCTTCGATCTTCTATATTCAGAGAACTGGTCAGAAAGAACTCGAATGTATCTGGAGATGAAACTGATGGGGAAGAGACAAAGGATCAACAGCAGCAGGCTGGTGATGGAGATGGTGAGTTGGGTGGGATCTTTTATGAAGGAATTGGAGATGATGTCCCATTTGTCTGTGATCCCAACAGATACAACTTGGAGCTGCCAGAAAGAGACTTCCAGTCCCTTTTATGA 1179 0.4444 MEMIMIKSEESKKRSQMCMSEGEFQGTRCVKRRRREASVAALNCDDNQSDQKQQIPQLQVDQNSSTNTVKRSSRFRGVSRHRWTGRFEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYKKEIETMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSTYIRWLKPARETILEAAVESQAVPEAHTEACPSIHTQIEENKSLALQSNSLTDYLNCPQMQDVFENKTHLISSNKASSPSALGLLLRSSIFRELVRKNSNVSGDETDGEETKDQQQQAGDGDGELGGIFYEGIGDDVPFVCDPNRYNLELPERDFQSLL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1984 392 CDD AP2 172 233 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 MobiDBLite consensus disorder prediction 42 73 - -
Bisa03g1984 392 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 48 305 - -
Bisa03g1984 392 ProSiteProfiles AP2/ERF domain profile. 74 137 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 SUPERFAMILY DNA-binding domain 73 139 IPR016177 GO:0003677
Bisa03g1984 392 MobiDBLite consensus disorder prediction 332 360 - -
Bisa03g1984 392 MobiDBLite consensus disorder prediction 41 73 - -
Bisa03g1984 392 MobiDBLite consensus disorder prediction 332 350 - -
Bisa03g1984 392 CDD AP2 73 139 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 PRINTS Ethylene responsive element binding protein signature 213 233 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 Gene3D AP2/ERF domain 172 233 IPR036955 GO:0003700|GO:0006355
Bisa03g1984 392 Gene3D AP2/ERF domain 73 139 IPR036955 GO:0003700|GO:0006355
Bisa03g1984 392 ProSiteProfiles AP2/ERF domain profile. 173 231 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 SUPERFAMILY DNA-binding domain 172 233 IPR016177 GO:0003677
Bisa03g1984 392 Pfam AP2 domain 73 129 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 Pfam AP2 domain 172 223 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 SMART rav1_2 173 237 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 SMART rav1_2 74 143 IPR001471 GO:0003700|GO:0006355
Bisa03g1984 392 FunFam AP2-like ethylene-responsive transcription factor 172 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1984 Bisa-ChrBisa03 28011313 28013284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1984 49 235 AP2-EREBP Transcription Factor Family AT5G57390 62.755 2.77e-80 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa03g1984 AP2 2e-09 CL0081