Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1977 ATGGGATTTGGGCATAATGCAATTAAGGCTGGGAGTTTGGATGTTGGCAAATCAAATGGAAGGAAGAAGAAAGATGGTGCAGAGAAGGAGAGTGGATGCTGGGCTAAATTCAGTTGCATCGGAAGCTGCATAACTTCGAGATCAAAGATTGATAACTCCATAAGTGGCACTAGTACCCATAATGTGGAAAACAAATGTACAAATGAGAAAACCAAAGACCAAACAGTTGCCCCTCCAGGGTCCTCCACAACTACTAGTAATGCAGGAAGCATTCCCTCCACTCCAAAATTTAGTGAGGAGTTGAAGTTTTCTTCTCGGTTGAGAAAATTCACATTCAATGAGCTTAAATTGGCAACAAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTCGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTCAAACCAGGTACTGGACTCACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAACTCAATTATCTTGGTGATCTTGTCCATCCTAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTATGAGTTTATGCCCCGTGGAAGTTTAGAGAACCATCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCAAAAGGTCTTGCCTTTCTTCATGAAGAAGCTCAGAGGCCTGTAATATATCGAGATTTTAAGACATCTAATATTCTATTAGATGCGGAATACAATGCCAAGCTATCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCAACAAGAGTAATGGGAACATATGGTTATGCAGCTCCAGAGTATGTGATGACTGGACACTTGACATCAAAAAGTGATGTCTACAGTTTTGGGGTGGTGCTACTTGAAATGCTTACTGGCCGACGATCAATTGATAAAAATAGACCAAATGGGGAGCACAACCTGGTTGAATGGGCAAGACCTGCACTTGGAGACCGGAGGATGTTCTACCGAATAATTGATCCTCGTCTTGAAGGTCACTTCTCAATCAAAGGTTCACATAAAGCTGCCCAGCTGGCTGCTCAGTGCCTTAGCCGTGATCCAAAATCTAGACCTATGATGAGTGAAGTTGTTCAAGCTCTAAAGCATTTGCCAAACCTTAAGGATATGGCTATTTCCTCTCAATACTTCCAGTTCACACGAGTAGATCGAACTATGTCCATGCCAAATTCTAAAAATGGTTTAAAAACACAGTTAGCATCTGTACCAAGAAAAGGGCAACCTGTAAGGACCTTGTCGAGTCCAAATGGCCCTCGAGGTTCTCCATATCATCACTATTCCAAGTCACCAAAACCTAATGGGTGA 1431 0.427 MGFGHNAIKAGSLDVGKSNGRKKKDGAEKESGCWAKFSCIGSCITSRSKIDNSISGTSTHNVENKCTNEKTKDQTVAPPGSSTTTSNAGSIPSTPKFSEELKFSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLVHPNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSIKGSHKAAQLAAQCLSRDPKSRPMMSEVVQALKHLPNLKDMAISSQYFQFTRVDRTMSMPNSKNGLKTQLASVPRKGQPVRTLSSPNGPRGSPYHHYSKSPKPNG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1977 476 Pfam Protein kinase domain 125 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1977 476 FunFam Serine/threonine-protein kinase BIK1 90 207 - -
Bisa03g1977 476 MobiDBLite consensus disorder prediction 54 95 - -
Bisa03g1977 476 MobiDBLite consensus disorder prediction 1 26 - -
Bisa03g1977 476 SUPERFAMILY Protein kinase-like (PK-like) 96 403 IPR011009 -
Bisa03g1977 476 Gene3D Transferase(Phosphotransferase) domain 1 208 426 - -
Bisa03g1977 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Bisa03g1977 476 Gene3D Phosphorylase Kinase; domain 1 102 207 - -
Bisa03g1977 476 PANTHER OS01G0588500 PROTEIN-RELATED 75 406 - -
Bisa03g1977 476 FunFam Probable serine/threonine-protein kinase PBL8 208 423 - -
Bisa03g1977 476 CDD STKc_IRAK 128 406 - -
Bisa03g1977 476 ProSitePatterns Protein kinases ATP-binding region signature. 128 160 IPR017441 GO:0005524
Bisa03g1977 476 MobiDBLite consensus disorder prediction 71 95 - -
Bisa03g1977 476 ProSiteProfiles Protein kinase domain profile. 122 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1977 476 MobiDBLite consensus disorder prediction 430 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1977 Bisa-ChrBisa03 27889702 27894098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1977 108 419 Glycoside Hydrolase AT3G07070 55.732 1.62e-115 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bisa03g1977 Pkinase 1.6e-46 CL0016