Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1968 ATGTCATTCCTCTTCCCAACATCCGCCATAAGAGTCCTTATCATCACCATTGTTCGTAAATTTGACATGACAATTATTAAAGTAGGCACAAACAAGGCATGTGCTGCATGTAAATACCGAAGAAGAAGATGCTCACAAGACTGCATCCTATCTCCATATTTCCCTGCAGAAAATCCTATAATTTTCCAAAATGCTCATCGATTATTTGGAGTCTGCAACATCAAAAGAATTCTGAGTCTGGTGCCTCCGAAACTCAGAGACGATTGCATGGTCTCCATTATTTTTGAATCTAACATGCGAAGAAGATACCCTGTTGAAGGCTGTGTGGCCGTTGCAAAGCATTATGAATTTCTGGTTTTGAAGGCCTTGGAAGAGCTACGATACGTGAAGATGCAAATCGCTTTTCTTAAGAGTCAACACAATCTTTCTCAACAAGTGCCTCCTAAATTACCAGAAAATTGTTCTGTTTCTCCATCAGAATTTGCTTCTAAGATGAAACTCCAGTCTTTACTGTGTGGAGTACCCTCAGACACTAGAGAATTTCTTTCAAGTTTTAATAGTAATTCACCTCCCTTATGTGATGCGATTGATGCTAATGTATAA 603 0.3897 MSFLFPTSAIRVLIITIVRKFDMTIIKVGTNKACAACKYRRRRCSQDCILSPYFPAENPIIFQNAHRLFGVCNIKRILSLVPPKLRDDCMVSIIFESNMRRRYPVEGCVAVAKHYEFLVLKALEELRYVKMQIAFLKSQHNLSQQVPPKLPENCSVSPSEFASKMKLQSLLCGVPSDTREFLSSFNSNSPPLCDAIDANV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1968 200 ProSiteProfiles LOB domain profile. 32 133 IPR004883 -
Bisa03g1968 200 Pfam Lateral organ boundaries (LOB) domain 33 126 IPR004883 -
Bisa03g1968 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 31 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1968 Bisa-ChrBisa03 27754819 27755421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1968 25 138 AS2 family AT3G47870 49.123 8.07e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa03g1968 LOB 4.8e-29 No_clan