Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1951 ATGGATGGTGATCAGGAAACAAGCATGGCTGTGGCAAGAAATAAGAGGAAAACTGGATCTATTCGATCTATTTTCATGCACGCTGATAGCCTAGATTGGTTTTTCATGGTCCTCGGTGTCATTGGGTCCGTTGGTGACGGCTTCTCCATGCCTCTGATGTTCTTTATTGGTAGCCGCTTGATGAACAATGTCGGCGGTGCTCTTACCATGGACGATAGCACTTTTCTTCGTAACATCAATAAGAATGCAGTTGCCTTGCTATATGTGGCTTCTGGCTCATTTCTTGTTTGCTTCATCGAGGGTTATTGTTGGACCAGAACGGGCGAGAGACAAGCTGCGAGAATGAGAGCAAGGTATTTGAGAGCAGTGCTCAGACAAGAAGTGGCTTACTTCGATCTGAACGTCACAAGCACGTCTGAGATTATCACCAGCGTCTCCAACGACAGCCTCGTGATTCAAGATGCTCTTGCTGAAAAGGTCCCAAACTTCTTGATGAACGTGTTTGGGTTCACCGGGAGCTACATAGTAGCTTTTGCAATGTTGTGGAGGCTGGCTATAGTGGGGTTCCCTTTCGTGATCCTTCTGGTGATCCCTGGTCTAATCTACGGAAGAACTCTGATGGAGTTGGCCAGAAAGGCGAGGAAAGAGTATAACCAGGCTGGTACAATAGCAGAGCAGGCCATATCTTCCATCAGAACCGTCTATTCCTTCGTAGGGGAAAGCAAGACCATAGCCGCTTTCTCCGATGCTCTCCAAGGATCTGTCAAGCTGGGTCTCAAGCAAGGCTTGGCTAAAGGCTTAGCCATCGGAAGCAACGGCGTCGTTTTCGCCATATGGTCTTTCATGTCGTACTACGGTAGCACATTGGTCATGGACCATGGCGCTCAAGGTGGTACCGTTTTCTCTGTCGGAGCCGCCATCGCTGTTGGTGGATTAGCTTTGGGATCTGCTTTATCCAACGTGAAGTACTTCTCGGACGCAAGTTCAGCAGGGGAACGCATAAGGGAAGTGATAAAAAGAGTCCCTACGATCGATTCGGAAAACATGGAAGGGGAGACTCTAGAGAGCGTTTCAGGGGAAGTGGAATTCGATCACGTGGACTTCGCGTACCCGTCGAGGCCAGACAACATTATCCTGAACGAATTCTGCTTGAAGATTCCGGCGGGGAAGACTGTGGCGCTGGTGGGTGGGAGTGGGTCGGGGAAGTCGACGGTGATATCGCTTTTGCAGAGATTCTATGACCCACATGGGGGAGAGATAAGGCTGGACGGGGTGGCCATTCGGAAGATGCAGCTCAAGTGGCTCAGGTCAACGATGGGGCTGGTGAGCCAGGAGCCTGCTCTGTTCGCGACCAGCATCAAAGAGAACATACTTTTCGGAAAGGAGGACGCTTCGATGGAAGAGGTTGTGGAGGCAGCCACAGCTTCCAATGCTTATAATTTCATCTCACAGTTGCCTCAAGGATACGATACCCAGGTTGGCGAAAGGGGAGTTCAGATGTCAGGTGGACAAAAACAAAGAATCGCCATTGCTCGAGCAATAATAAAGAAACCACGACTTCTTCTGCTGGACGAAGCAACCAGCGCATTAGACTCGGAGTCCGAACGAGTCGTTCAAGAGGCTCTGGACAAAGCAGCTGTGGCTCGCACCACCATCATCATAGCTCACCGCTTATCCACCATCCGAAATGCCGACGTCATTGCCGTCGTTCAGAGTGGAAAGATCATGGAGATGGGCTCACACGACGACCTCATCGGAAACGACAACGGACTTTACACCTCTCTCGTTCATCTCCAACAAACAGAACAATCCAAAAGCAAAGAAGACGTTATCTCTACCCCATCGTCCATATCAAACAGAGATAATAACACCAGCGGTCGTAGGCTTTCTCTGGTGAGTAGTTCTAGCTCCGCCATCTCAATAGCACCTAACCCAGCCTCACTTGTTGATGAAGATGATGGTAATTACGCTATAGAAGATCAGAAATCCCCTGTTCCTTCATTTCGGAGATTGTTGGCTCTTAATCTACCAGAATGGAAGCAGGCAACTTTGGGTTGTATCAGTGCAATGTTGTTCGGTGCGGTTCAGCCAGTATATGCGTTTGCGATGGGGTCTATGATATCTGTGTATTTTTTGACAGACCATGATGAGATCAAAGAGAAGACGAGGATTTATGCTCTCTGTTTTCTGGGGTTGGCTGTGTTCTCTTTGCTTATTAATATAAGCCAGCATTATAATTTCGCTTACATGGGAGAGTACCTAACTAAAAGGGTCAGAGAGAGAATGCTCTCGAAGATACTCACATTTGAAGTGGGATGGTTCGATCGGGATGAAAATTCCACTGGTGCTATTTGCTCTAGACTTGCCAAAGATGCTAATGTGGTGAGATCTTTGGTGGGAGATAGATCCGCTTTGCTGGTACAAACTTTCTCAGCAGTGATAGTAGCTTGCACAATGGGGTTGGTCATTGCATGGAGGCTGGCCATTGTTATGATAGCTGTCCAACCTATCATCATTGGTTGCTACTACACCAGGCGTGTACTACTTAAGAGCATGTCCGGCAAGGCCATCAAAGCCCAAGATGAAAGCAGCAAGTTAGTTGCCGAAGCCGTTTCTAATCTTCGCATTGTCACTGCTTTCTCTTCCCAAGATCGCGTTCTCAAAATGCTCGAAAAGGCCCAAGAAGGTCCAAAACAAGAGAGCATTCGCCAATCTTGGTATGCTGGTATTGGCCTTGCATGTTCCCAAAGCCTCATGTCTTGTACCTGGGCTTTAGACTTTTGGTATGGCGGCAAGCTTATCTCCCACGGCTACATCACTGCGAAGTCACTTTTTGAGACCTTCTTGATTTTGGTCGGCACAGGTCGTGTCATTGCTGATGCTGGAAGTATGACCTCGGACATCGCTAAGGGCTCTGATTCAGTGGGTTCTGTTTTTGCAGTTCTAGACAGGCACACAAAAATTGAGCCTGAGGACCCACATGTGTATAAGCCCGATAAGATGACAGGCCAAATAGAACTCCGCGATGTTCATTTTGCGTACCCGGCTAGACCTGATGTGACAATCTTTCAAGGGTTCTCATTCAAAATCGAAGCCGGGAAGTCGACAGCATTAGTTGGCCAAAGTGGGTCAGGAAAGTCAACCATAATAAGTTTAATAGAGAGATTCTATGACCCACTCAAAGGGACGGTGACCATAGACAACAAAGATATAAGGTTGTATCAACTCAGATCATTGAGGAAACACATAGCATTGGTTAGCCAAGAGCCCACATTATTCAGTGGGACCATAAGAGATAACATTTCATATGGAGCATCAGCGAAGGTTGACGAAGCAGAGCTCATAGAGGCTGCTAAAGCAGCAAACGCCCATGATTTCATAACAAGCCTGAAGGACGGGTACGACACGCCGTGTGGGGACAGAGGAGTGCAACTCTCGGGGGGTCAAAAGCAAAGAATTGCAATCGCGAGGGCCATACTGAAGAACCCAACAATTTTGTTGCTGGACGAGGCAACAAGTGCGCTGGATAGCTTGTCGGAGACGGTGGTGCAAGAGGCGCTAGAGCGCGTGATGGTAGGGCGGACGAGTATGGTGGTGGCTCATAGGTTGAGCACTATACAGAACTGTGATCTAATTGCTGTGTTGGACAAAGGGAATGTGATAGAAAAAGGGACCCACTCGTCTTTGTTATCTAAAAGACCCTCTGGAGCTTATTACTCTCTAGTAAGTTTTCAAAGGATGCCAGCCAATTCTGATAACTCAATTTAA 3768 0.4793 MDGDQETSMAVARNKRKTGSIRSIFMHADSLDWFFMVLGVIGSVGDGFSMPLMFFIGSRLMNNVGGALTMDDSTFLRNINKNAVALLYVASGSFLVCFIEGYCWTRTGERQAARMRARYLRAVLRQEVAYFDLNVTSTSEIITSVSNDSLVIQDALAEKVPNFLMNVFGFTGSYIVAFAMLWRLAIVGFPFVILLVIPGLIYGRTLMELARKARKEYNQAGTIAEQAISSIRTVYSFVGESKTIAAFSDALQGSVKLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSTLVMDHGAQGGTVFSVGAAIAVGGLALGSALSNVKYFSDASSAGERIREVIKRVPTIDSENMEGETLESVSGEVEFDHVDFAYPSRPDNIILNEFCLKIPAGKTVALVGGSGSGKSTVISLLQRFYDPHGGEIRLDGVAIRKMQLKWLRSTMGLVSQEPALFATSIKENILFGKEDASMEEVVEAATASNAYNFISQLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVARTTIIIAHRLSTIRNADVIAVVQSGKIMEMGSHDDLIGNDNGLYTSLVHLQQTEQSKSKEDVISTPSSISNRDNNTSGRRLSLVSSSSSAISIAPNPASLVDEDDGNYAIEDQKSPVPSFRRLLALNLPEWKQATLGCISAMLFGAVQPVYAFAMGSMISVYFLTDHDEIKEKTRIYALCFLGLAVFSLLINISQHYNFAYMGEYLTKRVRERMLSKILTFEVGWFDRDENSTGAICSRLAKDANVVRSLVGDRSALLVQTFSAVIVACTMGLVIAWRLAIVMIAVQPIIIGCYYTRRVLLKSMSGKAIKAQDESSKLVAEAVSNLRIVTAFSSQDRVLKMLEKAQEGPKQESIRQSWYAGIGLACSQSLMSCTWALDFWYGGKLISHGYITAKSLFETFLILVGTGRVIADAGSMTSDIAKGSDSVGSVFAVLDRHTKIEPEDPHVYKPDKMTGQIELRDVHFAYPARPDVTIFQGFSFKIEAGKSTALVGQSGSGKSTIISLIERFYDPLKGTVTIDNKDIRLYQLRSLRKHIALVSQEPTLFSGTIRDNISYGASAKVDEAELIEAAKAANAHDFITSLKDGYDTPCGDRGVQLSGGQKQRIAIARAILKNPTILLLDEATSALDSLSETVVQEALERVMVGRTSMVVAHRLSTIQNCDLIAVLDKGNVIEKGTHSSLLSKRPSGAYYSLVSFQRMPANSDNSI 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1951 1255 CDD ABC_MTABC3_MDL1_MDL2 361 599 - -
Bisa03g1951 1255 CDD ABC_6TM_Pgp_ABCB1_D2_like 672 988 - -
Bisa03g1951 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 37 326 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1951 1255 SMART AAA_5 1032 1205 IPR003593 GO:0016887
Bisa03g1951 1255 SMART AAA_5 388 574 IPR003593 GO:0016887
Bisa03g1951 1255 SUPERFAMILY ABC transporter transmembrane region 664 990 IPR036640 GO:0005524|GO:0016020
Bisa03g1951 1255 MobiDBLite consensus disorder prediction 603 627 - -
Bisa03g1951 1255 FunFam ABC transporter B family member 1 23 360 - -
Bisa03g1951 1255 Pfam ABC transporter transmembrane region 684 949 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1951 1255 Pfam ABC transporter transmembrane region 37 306 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1951 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 994 1245 IPR027417 -
Bisa03g1951 1255 ProSitePatterns ABC transporters family signature. 500 514 IPR017871 GO:0005524|GO:0016887
Bisa03g1951 1255 SUPERFAMILY ABC transporter transmembrane region 30 334 IPR036640 GO:0005524|GO:0016020
Bisa03g1951 1255 FunFam ABC transporter B family member 1 351 600 - -
Bisa03g1951 1255 Pfam ABC transporter 380 528 IPR003439 GO:0005524
Bisa03g1951 1255 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 334 - -
Bisa03g1951 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 354 599 IPR027417 -
Bisa03g1951 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1242 IPR003439 GO:0005524
Bisa03g1951 1255 Pfam ABC transporter 1024 1173 IPR003439 GO:0005524
Bisa03g1951 1255 Gene3D ABC transporter type 1, transmembrane domain 24 974 IPR036640 GO:0005524|GO:0016020
Bisa03g1951 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 597 IPR003439 GO:0005524
Bisa03g1951 1255 PANTHER ABC TRANSPORTER B FAMILY 12 742 IPR039421 -
Bisa03g1951 1255 ProSitePatterns ABC transporters family signature. 1145 1159 IPR017871 GO:0005524|GO:0016887
Bisa03g1951 1255 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 684 970 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1951 1255 CDD ABC_MTABC3_MDL1_MDL2 1005 1245 - -
Bisa03g1951 1255 FunFam ABC transporter B family member 4 995 1251 - -
Bisa03g1951 1255 Gene3D - 995 1253 IPR027417 -
Bisa03g1951 1255 Gene3D - 351 600 IPR027417 -
Bisa03g1951 1255 FunFam Putative ABC transporter B family member 8 648 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1951 Bisa-ChrBisa03 27242109 27249334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1951 20 1247 Calmodulin-binding Proteins AT2G36910 44.462 0.0 1061