Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1944 ATGGAGAGCTCTGAGAAGGTGGTTGCTGTGATTATGGTTGGCGGACCCACTAAAGGCACCAGATTCCGGCCTCTTTCGTTCAATGTTCCCAAACCCCTTTTCCCCTTGGCTGGTCTGCCAATGGTTCAGCATCCTATTTCTGCTTGTAAAAGGATACCGAATTTGGCTCAAATATTTCTGGTTGGATTCTATGAGGAGCGAGATTTTACTCTATATGTCTCTTCGATTTCGAATGAGCTGAAGTTACCAGTAAGATATTTGAAGGAGGATAAACCACATGGTTCAGCTGGTGGCCTATACTGCTTCAGAGATATTATCATGGAGGACAACCCATCACATATTTTCCTGCTAAATTGTGATGTTTGCTGCAGTTTTCCACTATCAGCCATGCTTGGGGCCCATAAAAAATATGGTGGGATAGGGACCGTGCTAGTAATCAAGGTTTCTGCTGAATCAGCCAGCCAGTTTGGTGAGTTGGTTGCTGATCCAATCACTAATGAATTGCTGCATTATACAGAGAAACCTGAGACTTTTGTCAGTGATTTGATAAATTGTGGTGTCTATGTATTTACCCCAGATATTTTTACTGTGATCCAAGATGTACTTATTAATCGAGAAGACAGAGCTAATCTACGCCCTGTCTCCAGTGTTGAAGCCCACCAAATTGCCCCAAGCGCAAGGACTCTTCCTATAGATTTTGTGAGACTGGATCAAGATATTTTGTCTCCACTTGCTGGAAAGAACCAGTTATATACGTATGAGACAATGAATTTCTGGGAGCAAATTAAAACTCCTGGAATGTCTTTGAAATGCTCAGAGTTGTATCTCGCCCAATTCCACTCTACTTCGCCCCATCTCTTGGCCAATGGAAATGGTAAAAAGAATGCTACGATTGATGGTGATGTATATATTCATCCATCTGCAAAAGTACATCCAACTGCAAAGATTGGTCCCAACGTTTCCATATCAGCAAATGTTCGTGTAGGTGCAGGTGTTAGGCTAGTCAGTTGTATTATCTTGGATGATGTTGAAATCAAGGAAAATGCTGTTGTTATAAATTCTATTGTTGGATGGAAGTCATCACTTGGAAGATGGTCGCGGGTACAGGCTGATGGAGATTACAATGCAAAGCTCGGAACAACCATCCTCGGAGAAGCCGTGACTGTTGAAGATGAGGTGGTGGTGATCAGCAGCATTGTTCTTCCCCACAAGACTCTCAATGTCAGTGTACAAGAGGAAATAATCTTATGA 1251 0.4245 MESSEKVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGLPMVQHPISACKRIPNLAQIFLVGFYEERDFTLYVSSISNELKLPVRYLKEDKPHGSAGGLYCFRDIIMEDNPSHIFLLNCDVCCSFPLSAMLGAHKKYGGIGTVLVIKVSAESASQFGELVADPITNELLHYTEKPETFVSDLINCGVYVFTPDIFTVIQDVLINREDRANLRPVSSVEAHQIAPSARTLPIDFVRLDQDILSPLAGKNQLYTYETMNFWEQIKTPGMSLKCSELYLAQFHSTSPHLLANGNGKKNATIDGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLVSCIILDDVEIKENAVVINSIVGWKSSLGRWSRVQADGDYNAKLGTTILGEAVTVEDEVVVISSIVLPHKTLNVSVQEEIIL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1944 416 CDD M1P_guanylylT_A_like_N 9 275 - -
Bisa03g1944 416 Gene3D Hexapeptide repeat proteins 285 412 - -
Bisa03g1944 416 FunFam Mannose-1-phosphate guanyltransferase alpha 6 279 - -
Bisa03g1944 416 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 358 IPR029044 -
Bisa03g1944 416 FunFam Putative GDP-mannose pyrophosphorylase 285 413 - -
Bisa03g1944 416 Pfam Nucleotidyl transferase 9 204 IPR005835 GO:0009058
Bisa03g1944 416 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 8 416 - -
Bisa03g1944 416 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 279 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1944 Bisa-ChrBisa03 27109230 27114436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1944 1 200 Eukaryotic Initiation Factors Gene Family AT2G34970 20.763 4.76e-06 47.0