Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1923 ATGGCGGGTGGAACTGAAGCTTTCCCTGATTTAGGAAAACACTGCCAATTCGACCATTGCAACCTGCTTGATTTCCTCCCTTTCACATGCGACGGTTGTCGACAGGTGTTCTGCCTGGAGCATAGATCTTACAAATCCCACGATTGCCCCAAATCGGACCATAAGAGCAGGAAGGTTGTAGTGTGCGAGACATGCTCGATGTCTATTGAAACCACGGGTCAAAACGGAGAAGACGAGAAGGCAATCTTAGAGAGGCACGATAAGTCTGGAGATTGTGACCCTAAGAAGAAGAAGAAGCCTACGTGTTCTGTAAGGAGGTGCAAGGAGGTTTTGACGTTTTCGAATACCAGTACGTGTAAAACGTGTCACTTGAAGGTGTGCCTCAAGCATCGCTTTCCCGCCGATCATGCTTGTAAGAAGGCTACTTCGTCTTCTTCCTCGTTGGAGGATAAAGCTGTTAACTGCCGATGGAACAATCGGTTCCTGGCGGCTCTGGCGTTAAGGAACGGACAAGACTGTGCTAAGAGTTCTACGTCTGCTCGTCCTCCTAGCACTCCATCTGTAAAAGCTTGCTGA 576 0.4878 MAGGTEAFPDLGKHCQFDHCNLLDFLPFTCDGCRQVFCLEHRSYKSHDCPKSDHKSRKVVVCETCSMSIETTGQNGEDEKAILERHDKSGDCDPKKKKKPTCSVRRCKEVLTFSNTSTCKTCHLKVCLKHRFPADHACKKATSSSSSLEDKAVNCRWNNRFLAALALRNGQDCAKSSTSARPPSTPSVKAC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1923 191 Gene3D - 77 156 IPR035896 -
Bisa03g1923 191 SUPERFAMILY AN1-like Zinc finger 5 58 IPR035896 -
Bisa03g1923 191 FunFam AN1-type zinc finger protein 2B isoform X1 5 66 - -
Bisa03g1923 191 SUPERFAMILY AN1-like Zinc finger 94 143 IPR035896 -
Bisa03g1923 191 Gene3D - 2 68 IPR035896 -
Bisa03g1923 191 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Bisa03g1923 191 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Bisa03g1923 191 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Bisa03g1923 191 Pfam AN1-like Zinc finger 102 142 IPR000058 GO:0008270
Bisa03g1923 191 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Bisa03g1923 191 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Bisa03g1923 191 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1923 Bisa-ChrBisa03 26816370 26817028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1923 2 173 C2H2 Transcription Factor Family AT3G28210 63.953 8.61e-80 234