Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1909 ATGGAACGAGTTCCTATGTGGGTAGTCCTTGTTTCATGTCTTCTCCTCCTTAACACCACAAACTGTGTGGAGGACGATGTGAAGAGCATAATGATAAGCTTCCTTGAGAAACTCTCTTTTCAACAAAATGTGTCTACTCTGGCTTGGAGACCAGACTCTGATCCATGCAAGGATCTCTGGAAAGGCGTAATCTGCGATAGACGAAAAGTATCAGTAACGAAGCTACTGCTTGACAGGTTGGGATTATCTGGAACTCTTGATGCTGTTATGCTCTGCAACTCTCAGCCTCTTGCTGCTTCTCTTTCTATGCTCAGCCTTGATGGGAACAACATTAATGGAGGAATAGCCCCTGAGATTGGAAAGTGCAAACAGCTGACTCGCTTGGTTCTAAGTGGGAACCATCTTTCTGGGGAACTTCCAGGTTCCCTTGCCAGGTTGAATAATCTGAAAAGACTTGACATTTCCAACAACAAGTTTTTTGGTCACGTGCCAGACTTGTCCAGAATCTCAGGGCTGAATGTGTTTCTTGCCCAGAACAATCAGCTTATTGGGGAGATACCCGGGTTTGATTTCTCCAATATTGTTCGCTTCAATGTTTCGTTTAACAATCTTAGTGGCCAAATTCCAGATGTGCAGGGCTATTTCTCTGAAGACAGCTTCTTGGGTAATCCTCAACTCTGTGGAGATCCTTTGCGAATAAACTGTTCTGCTCTTCCTGCTGGTGATAACTTAGTTGAATCAAATGGATCAAACGAATCAAATAGCTCGAATGGATCTAATGAATCAAATGGATCAAAGGATCTTTCAAAAGACCAGATTTTGATGTATTCGGGATATGCTGCATTGGGTTTGGTAATTGTCCTTTTCATGGTTTATAAACTATGTACGAGAAAGAAGGCTGAAGCAGCGAATAATGTCGCAGCAAGTGATCATGGTCGTGTTGACAAACCTAGCAGTTCTTCAAGTGAATACAAATCAGGCATAAGCAGATCGGAGTTGTCTGTAAATTCTGAAAGTGGGATGGTTTCACAATCACTTATAGTTCTTACACAACCTGTGCTTAGTGAAATGAAACTCGAGGACTTGTTGAGGGCTCCTGCAGAATTGCTAGGAAGAGGAACGTATGGTAGTCTTTATAAAGTGATGCTAGACAATGGGAGGACGGTGGTTGTGAAGAGGATTAAGGACTCGGCTACTTCCAGCGATGACTTCAGGCAAAGAATGGAGACTCTGGGCCGATTGAAGCACCCTTTTGTTCTATCACCACTTGCTTTCTATTGTTCCAAACAAGAGAAGCTTTTGGTCTATGAGTATCAGGAAAAGGGAAGCCTGTTCAAGCTTCTACATGGTGATTCAAAAGGCTTTGACTGGACCAGCAGGATAGGAATAGCAGCAATGGTAGCAGAGGGACTGGCATTCATGCACAAAGAGCTTGAAGAAGACGGCATTGCACATGGCAACCTGAAATCCTCCAACATTCTGCTGAACCACAACATGGAGGCAGGCATAAGCGAGTACGGCGTGATGGTCATGGACGACCGATACAGCTCGTCGTTGGCGAGCCCTCATCCTGGAGGGGGAGCAGCAAACGGGTTCAAGGGCGACGTGTACGGGTTCGGGGTGATTCTTCTGGAACTGCTCACAGGGAAGTTGGTGAAGAGCAATGGAGTGGACTTGCCGGAGTGGGTGAGGTCAGTGGTGAGGGAGGAATGGACCGGGGAGGTGTTTGACAGGTCGCTGATATCAGAGTATGCGAGTGAAGAGAGGATGGTGAATCTGCTTCGAGTGGCTATAAAGTGTGTTCATCAGTCTCCTGAGGCTAGGCCCAGTATGAACCAGGTGGCTCTCATGATTAGTACTATAAAAGAGGAAGAAGAGAAGTCGTTGATCTATGAAATTTGA 1902 0.4543 MERVPMWVVLVSCLLLLNTTNCVEDDVKSIMISFLEKLSFQQNVSTLAWRPDSDPCKDLWKGVICDRRKVSVTKLLLDRLGLSGTLDAVMLCNSQPLAASLSMLSLDGNNINGGIAPEIGKCKQLTRLVLSGNHLSGELPGSLARLNNLKRLDISNNKFFGHVPDLSRISGLNVFLAQNNQLIGEIPGFDFSNIVRFNVSFNNLSGQIPDVQGYFSEDSFLGNPQLCGDPLRINCSALPAGDNLVESNGSNESNSSNGSNESNGSKDLSKDQILMYSGYAALGLVIVLFMVYKLCTRKKAEAANNVAASDHGRVDKPSSSSSEYKSGISRSELSVNSESGMVSQSLIVLTQPVLSEMKLEDLLRAPAELLGRGTYGSLYKVMLDNGRTVVVKRIKDSATSSDDFRQRMETLGRLKHPFVLSPLAFYCSKQEKLLVYEYQEKGSLFKLLHGDSKGFDWTSRIGIAAMVAEGLAFMHKELEEDGIAHGNLKSSNILLNHNMEAGISEYGVMVMDDRYSSSLASPHPGGGAANGFKGDVYGFGVILLELLTGKLVKSNGVDLPEWVRSVVREEWTGEVFDRSLISEYASEERMVNLLRVAIKCVHQSPEARPSMNQVALMISTIKEEEEKSLIYEI 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1909 633 Gene3D Phosphorylase Kinase; domain 1 331 438 - -
Bisa03g1909 633 Pfam Protein kinase domain 368 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1909 633 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Bisa03g1909 633 PANTHER OS05G0588300 PROTEIN 8 623 - -
Bisa03g1909 633 Gene3D Ribonuclease Inhibitor 21 235 IPR032675 -
Bisa03g1909 633 SUPERFAMILY L domain-like 30 213 - -
Bisa03g1909 633 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Bisa03g1909 633 SUPERFAMILY Protein kinase-like (PK-like) 367 617 IPR011009 -
Bisa03g1909 633 MobiDBLite consensus disorder prediction 244 266 - -
Bisa03g1909 633 ProSiteProfiles Protein kinase domain profile. 364 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1909 633 MobiDBLite consensus disorder prediction 305 329 - -
Bisa03g1909 633 Gene3D Transferase(Phosphotransferase) domain 1 440 632 - -
Bisa03g1909 633 FunFam Leucine-rich repeat receptor protein kinase EMS1 93 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1909 Bisa-ChrBisa03 26594485 26597396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1909 48 622 Receptor kinase-like Gene Family AT1G68400 35.632 8.41e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa03g1909 Pkinase 7.7e-25 CL0016