LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g1905	ATGCTTACCTCTCCGCAGAAGGAATCATGGAAGACTCTGTTAACTCTGGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACTTCCCCTATTTACGTTTACAAAAGCACTTTCGCTGAGGATATCCAACACTCAGAGACTAATGAAGAAATATACGGGGTCTTGTCTTTTGTCTTCTGGACGCTCACACTTATACCGCTGGTCAAGTATGTGTTCATTGTGCTTAAAGCAGACGACAATGGCGAAGGAGGGACTTTTGCTTTGTATTCCCTGCTATGCCGGCATGCACGGGTTAGCTTACTGCCTAATACCCAGCTCGCAGACGAGGACCTAACGGAGTATACGAAAGATGGGATTGTTGAAACCTATGAGAAAAATGTTAGGTCTGGATTGAAATCGATATTGGAGAAACATAGGGTGCTCCAGAAGGTTCTGCTTGTTCTGGCTTTGATAGGGACTTGCATGGTCATTGGGGATGGAGTGCTCACACCTGCAATTTCTGTCTTCTCTGCTGTGTCAGGCCTCGAGCTTTCCATGTCAAAAGAGCAGCACCGATATGTTGAGGTTCCAGTTGCTTGTATAATACTGGTATTTTTGTTTGCCCTTCAACATTATGGGACCCACCGTGTGGGTTTCCTCTTTGCACCTGTTGTGATGACCTGGCTGCTATGCATCAGCACCATCGGTGTTTATAATATCTTCCATTGGAACCCACATGTATACGAAGCAATCTCCCCATATTATATGTTCAAGTTTCTAAGAAAGACCCAAAGGGGAGGTTGGATGTCCTTGGGTGGGATTCTACTGTGTATGACGGGTTCAGAAGCCATGTTTGCTGATCTAGGACACTTTTCACAGTTGTCAATTAAGATTGCTTTCACCTTTTTCGTGTACCCTTCTTTAGTCCTGGCATATATGGGACAAGCTGCTTATCTTTCCAGGCATCATTCCCTTGAAAGCGACTACAGGATTGGCTTCTACGTCTCTGTACCTGAGAAAATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTGGTTGGAAGTCAAGCTGTCATCACCGGGACTTTCTCAATAATCAAACAATGTTCTGCTCTGGGATGCTTCCCCAGAGTGAAAATCATCCATACATCTTCTAAGGTACATGGCCAGATTTACATTCCAGAGATCAACTGGAGTCTGATGCTACTTTGCCTTGCCATTACCGTCGGATTTAGAGACACAAAACGCATGGGAAATGCCTCAGGCTTGGCTGTCATAACTGTCATGTTGGTGACCACTTGCTTGATGTCTTTAGTTATCATCTTATGCTGGCACAAAAGTGTTCTTCTAGCCATTTGCTTTATATTCTTCTTTGGCTCCATTGAAGCACTCTACTTCTCTGCATCCCTCATCAAGTTCCTTGAAGGGGCTTGGGTTCCTATTGCCCTCTCCTTCATATTCCTTATTGTCATGTATATATGGCACTATGGCACAATTAAGAAGTATGAGTTTGATGTTCAAAATAAGGTCTCCATCAACTGGCTTCTTGGTCTTGGCCCTTCTCTAGGAATTGCAAGAGTCCGGGGAATCGGCCTTGTGCACACTGAGCTTGTGTCTGGGATCCCAGCTATATTCTCTCACTTTGTCACCAATCTCCCAGCTTTCCATCAGGTTGTAGTCTTCCTCTGCATCAAATCTGTCCCAGTGCCACATGTCAGACCTAAAGAAAGGTTCTTGGTGGGTAGAGTTGGCCCAAGGGAGTATCGGCTTTATAGGTGCATAGCACGGTATGGCTATCGTGATGTTGACAAGGACGACATAGAGTTTGAGCAAGATCTTGTTTGCAGTATAGCTGACTTTATCCGATCCGACACTTCAGAATCTGGCTTAGGATTTGAGAATTGTGAAGATGATTCAAGGATGACAGTTGTTGGGACCACAGCATCAAAATCAAAAGGTGTAAGAATGTGTGAGGATGATCTGGATTCTGTTCAAGCAGAAGGTACTTCAGAGCTAATGGAGGTTAAACCTGCTGAGAAAGTTAGGAAACGAGTGAGGTTTGTTGTACCAGAGAGTCCACAGATCGATTCAAACGCGAGGGAGGAGTTGAAGGAGCTAATGGAGGCAAGAGAAGCAGGAATGGCATTCATAATGGGTCACTCATATGTGAGAGCAAAAAGTGGATCAAGCTGGATAAAGAAGGTTGTGATTAATTATGGGTATGATTTCCTGAGGAGAAACTCTAGGGGACCAACATATGCCTTAAGCATCCCCCATGCATCTACCTTAGAGGTGGGCATGATCTATCATGTTTGA	2307	0.4452	MLTSPQKESWKTLLTLAYQSLGVVYGDLSTSPIYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLVKYVFIVLKADDNGEGGTFALYSLLCRHARVSLLPNTQLADEDLTEYTKDGIVETYEKNVRSGLKSILEKHRVLQKVLLVLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHRYVEVPVACIILVFLFALQHYGTHRVGFLFAPVVMTWLLCISTIGVYNIFHWNPHVYEAISPYYMFKFLRKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFTFFVYPSLVLAYMGQAAYLSRHHSLESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPRVKIIHTSSKVHGQIYIPEINWSLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIILCWHKSVLLAICFIFFFGSIEALYFSASLIKFLEGAWVPIALSFIFLIVMYIWHYGTIKKYEFDVQNKVSINWLLGLGPSLGIARVRGIGLVHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKSVPVPHVRPKERFLVGRVGPREYRLYRCIARYGYRDVDKDDIEFEQDLVCSIADFIRSDTSESGLGFENCEDDSRMTVVGTTASKSKGVRMCEDDLDSVQAEGTSELMEVKPAEKVRKRVRFVVPESPQIDSNAREELKELMEAREAGMAFIMGHSYVRAKSGSSWIKKVVINYGYDFLRRNSRGPTYALSIPHASTLEVGMIYHV	768

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g1905	768	Pfam	K+ potassium transporter	18	598	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa03g1905	768	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	7	767	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Bisa03g1905	768	NCBIfam	potassium uptake protein	16	768	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g1905	Bisa-ChrBisa03	26520018	26525315	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g1905	6	766	Inorganic Solute Cotransporters	AT5G14880	76.873	0.0	1226