Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1880 ATGGACAGCAGAATTGAGAGCACAGAAACTCACAGCACTAAACATGGCATTTATCATAATAGGAATAAGTGTGCAGCATGCTTCAGACAGTTCAACAAAATGGAGCACCTTGTGGAACACATGAGGATCTCATATCATTCAGTTCACGAACCCACCTGTGGCATTTGCGGGAAACACTGCAGGTCCTTTGAGTCTCTTAGGGAACATCTTATAGGTCCATTGCCAAGACAAGAGTGCAGAGATATTTTTGCCAACCGAGGATGCAAATTCTGCTTGAAGGTCCTTGAGAGTCCTTACGCTCGAAGGATCCACCAAGAAAGATGCCAACTTTCTGGAACTGCTGGACTAGTTGCTCGCTTTTCAAACTTAGGCATCCGTGATAATCTGAACATTGGAAGAGGGGCACAAGTAGTTGCACTTGCTTGCAAAATGGTTGGCGGAGGCAGCGATGGCTCCCTGGATCTCTGTGCGAGAATCTGCATAATTGACGAACACGAAAACATCATCTTCCATACTTATGTGAAGCCCCCAATTCCTGTCACAAGCTATAGGTATGAGACAACAGGTATTCGACCGGAATACTTGAGGGATGCAATGCCGATGAGGCAAGTTCAAAAGAAGGTTCAAGACTTTCTCTGCAATGGGGAACCCATGTGGAAGATTCGACCAAGAGGTGGAAAAGCAAGGATTCTTGTAGGTCATGGTTTAGATCATGACCTTGAATGTTTGCAAATGGAATATCGAGCAGAAATGATCAGGGACACTGCAAAATACCCTCCATTGATGAAAACGAGCAAGCTCAGCAACTCACTCAAGTACTTGACCCAAGCATATCTTGGGTATGAGATTCAAACTGGGATTCAGGATCCTTATGAGGACTGTGTAGCAACGATGAGGCTATACATGAGGATGAGATCACAAGTACACAGAAAAGAGGAATACCCTTTGGCTTCCGACCCACAAAACAAGAACAACTTTGCTTCATGGAGGCAAAGTGAGCTTGAGAGAATGACCCCGGAACAAATACTGGCAATCTCAAGGTCTGACTACTACTGCTGGTGCTTGGATTCCATATGA 1077 0.4494 MDSRIESTETHSTKHGIYHNRNKCAACFRQFNKMEHLVEHMRISYHSVHEPTCGICGKHCRSFESLREHLIGPLPRQECRDIFANRGCKFCLKVLESPYARRIHQERCQLSGTAGLVARFSNLGIRDNLNIGRGAQVVALACKMVGGGSDGSLDLCARICIIDEHENIIFHTYVKPPIPVTSYRYETTGIRPEYLRDAMPMRQVQKKVQDFLCNGEPMWKIRPRGGKARILVGHGLDHDLECLQMEYRAEMIRDTAKYPPLMKTSKLSNSLKYLTQAYLGYEIQTGIQDPYEDCVATMRLYMRMRSQVHRKEEYPLASDPQNKNNFASWRQSELERMTPEQILAISRSDYYCWCLDSI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1880 358 Gene3D - 134 323 IPR036397 GO:0003676
Bisa03g1880 358 SMART exoiiiendus 136 310 IPR013520 -
Bisa03g1880 358 FunFam RNA exonuclease 4 133 320 - -
Bisa03g1880 358 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 25 356 IPR047021 GO:0004527
Bisa03g1880 358 SUPERFAMILY Ribonuclease H-like 150 305 IPR012337 -
Bisa03g1880 358 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 51 IPR013087 -
Bisa03g1880 358 Pfam Exonuclease 154 300 IPR013520 -
Bisa03g1880 358 CDD REX4_like 138 301 IPR037431 GO:0006364|GO:0008408
Bisa03g1880 358 ProSitePatterns Zinc finger C2H2 type domain signature. 24 46 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1880 Bisa-ChrBisa03 26116542 26118376 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1880 21 358 C2H2 Transcription Factor Family AT5G40310 76.385 0.0 566