Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1867 ATGGAGCATGTATCAGAAAAAAGATTTCCTCTCAGTGCAAAAGATTATAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCACTGTGTACAGGGCTCTCTGTATTCCACTCAATGAGATAGTTGCCATCAAGGTTCTTGATCTTGAAAGGTGCAACAATGATCTGGATGGCATCAGGAGAGAGGTACAAACAATGATCTTGATCGACCATCCTAATATTTTACGGGCACATTGCTCTTTCACTGCTGGACACAACCTTTGGGTTGTGATGCCCTACATGGCTGGGGGATCCTGCCTTCATATAATGAAATCTGACTATTCTGAGGGTTTTGAAGAGCCTGTCATTGCTTGTTTATTGCGGGAGGTTCTCAAAGCTCTTGTCTATCTTCATGCTCATGGGCACATACATAGGGATGTTAAGGCTGGGAATATTTTGATTGATTCTACTGGTGCAGTCAAATTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATGCTGGAGATAGGCAACGATCGAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGACTTTAAAGCAGACATTTGGTCATTTGGTATAACAGCGCTTGAACTTGCCCATGGTCATGCTCCGTTTTCCAAGTATCCACCAATGAAAGTGTTGCTTATGACTTTACAAAATGCCCCTCCAGGTCTTGATTACGAAAGAGACAAGAGATTTTCTAAGTCTTTCAAAGAGATGGTAGGCACCTGCTTAGTGAAGGACCCAAAGAAACGGCCAACTTCAGAAAAGCTTTTAAAGCATCCATTCTTTAAACATGCACGCTCCACTGAATATTTAACTCGCACCATTCTAGATGGCCTTCCACCTCTTGGAGATCGTTTTAGGTTGCTGAAGGCCAAAGAGGCTGATTTATTGGTGCAGAATAAGGCTCTTTATGAGGATAAAGAACAACTATCACAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTCAACCTTGAGGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGATATGCCAAATGTGGAAGAGCAAGATATGGATAAGAAGCTACAAAAGAGGTCTGATGATAATGGGGTTCCGGCAGAGGGGTTAACGGCTATAACAACTGACCATTCAGATGCTACACCCACGCTGGACAAGGAGGATGGGTTCAATGATCTTCAGGATTTGGAGAGTTCATTTTCTTCATTTCCAATTAAACCTCTTGAAGCACTTAAAGGTTGTTTTGATATTGGTGAGGATGATGTAAATAATACTAGTCTGAGGGATTTGGATCGGGATTATGGAAGAAACGAGAATGGAAGTTCCGGGCTGAGTAGTTCATTGCCACAAAATGCTATGACTGAGCCTAAAAAGTATTTGAGTGGTTCTTTGCTGCCTGATAATTTTCTTGCTCCTAAAAAAGTTGTTACCGATGGGGACAGGGATTATTTGCAAGCAAAATACTATCCTGAGCGGAATCATAGTGGTCCATTATTATATCGTCAGAAGAGAGAGACCAACAACCTTTCATCTGTTGACGATGCATCAGAAGGAGCAGTTATACAGCGCAAGGGGCGTTTTAAGGTTACATCATCAGATCTCAGTCCTAAGGGTCCTTCAAATGGCACTTTTGGCCCAGTTCCTGGAGGTTCTATCAGTCCACCAAATCAAAACTTTACAGTTGCCTCTATTCTTCCATCACTGCATTACATTTTGCAACAGAACAGTTTGCAAAGGGAAGAAATTATTAAGTTAATAAAGTATGCAGAGCAATCTTGTGGCAAGAATACAGAATTAGCAGAGGCAGGGATAGTTGATCTTTTGCAGGTGCCACCTGCAACATCTAGGGAGAGAGAGCTGCATTTGCAGGTGATTCAACTACAACAGAGCATTGCGAGTCTTGCTGAGGAATTGCAGAGACAAAAAATAAAAAATGCGCAGTTGGAGAAGCAGTTAAATTCTATGGCCAACAGAGTGGAAGAGTGA 2022 0.4154 MEHVSEKRFPLSAKDYKLYEEVGEGVSATVYRALCIPLNEIVAIKVLDLERCNNDLDGIRREVQTMILIDHPNILRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSDYSEGFEEPVIACLLREVLKALVYLHAHGHIHRDVKAGNILIDSTGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVGTCLVKDPKKRPTSEKLLKHPFFKHARSTEYLTRTILDGLPPLGDRFRLLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDMPNVEEQDMDKKLQKRSDDNGVPAEGLTAITTDHSDATPTLDKEDGFNDLQDLESSFSSFPIKPLEALKGCFDIGEDDVNNTSLRDLDRDYGRNENGSSGLSSSLPQNAMTEPKKYLSGSLLPDNFLAPKKVVTDGDRDYLQAKYYPERNHSGPLLYRQKRETNNLSSVDDASEGAVIQRKGRFKVTSSDLSPKGPSNGTFGPVPGGSISPPNQNFTVASILPSLHYILQQNSLQREEIIKLIKYAEQSCGKNTELAEAGIVDLLQVPPATSRERELHLQVIQLQQSIASLAEELQRQKIKNAQLEKQLNSMANRVEE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1867 673 MobiDBLite consensus disorder prediction 440 464 - -
Bisa03g1867 673 SUPERFAMILY Protein kinase-like (PK-like) 14 304 IPR011009 -
Bisa03g1867 673 MobiDBLite consensus disorder prediction 360 374 - -
Bisa03g1867 673 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bisa03g1867 673 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1867 673 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1867 673 Coils Coil 636 673 - -
Bisa03g1867 673 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Bisa03g1867 673 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1867 673 MobiDBLite consensus disorder prediction 450 464 - -
Bisa03g1867 673 MobiDBLite consensus disorder prediction 352 401 - -
Bisa03g1867 673 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Bisa03g1867 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 654 IPR047173 GO:0043539
Bisa03g1867 673 Gene3D Transferase(Phosphotransferase) domain 1 97 294 - -
Bisa03g1867 673 MobiDBLite consensus disorder prediction 538 564 - -
Bisa03g1867 673 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Bisa03g1867 673 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1867 Bisa-ChrBisa03 25931984 25942971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1867 1 670 MAP Kinase Kinase Kinase Kinase AT5G14720 67.686 0.0 958
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bisa03g1867 Pkinase 3e-59 CL0016