Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1857 ATGGACAAAAAACCGTGCAATTCATCTCAGGATCCTGAAGTGAGAAAAGGGCCATGGACCATGGAAGAAGACTTGATCTTGATCAACTATATCGCAAATCATGGCGAAGGTGTCTGGAACTCCTTAGCCAAGGCTGCAGGTCTTAAACGTACAGGAAAAAGTTGCCGGCTCCGGTGGCTAAACTACCTTCGTCCTGATGTTAGAAGAGGGAATATTACACCAGAGGAACAGCTTTTGATCATGGAGCTTCATGCAAAGTGGGGAAACAGATGGTCAAAAATCGCGAAGCATCTACCGGGAAGAACTGACAACGAGATTAAAAACTACTGGAGGACAAGGATTCAGAAGCACATTAAGCAAGCTGAGAACTACCAGCAGCAGCAGCAGCAGCACCACCACCACCACCAACAACCGCAGCTAAGCTCCGAGACCAATGATCAGCAAGCTAGCAGCAGCCACGTGTCCACCATCATGGTCGATCATCACCATCATCATGATCATCATCACCATCCAATGGACACATACTCTCCATCCTCCTTCCATCAACCAACAATCTCCACCACTGATCCCTTTCCACCTCATCAGTTTTCCACCGTACTGGATAACTCCTCCACTTGTACCACCCATGAGAATAACTATTGGAGCATGGAGGATCTCTGGTCCAATATGCAATTACTTAATGGGGATTGA 690 0.471 MDKKPCNSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENYQQQQQQHHHHHQQPQLSSETNDQQASSSHVSTIMVDHHHHHDHHHHPMDTYSPSSFHQPTISTTDPFPPHQFSTVLDNSSTCTTHENNYWSMEDLWSNMQLLNGD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1857 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bisa03g1857 229 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bisa03g1857 229 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 11 189 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa03g1857 229 Gene3D - 16 68 - -
Bisa03g1857 229 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bisa03g1857 229 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bisa03g1857 229 CDD SANT 73 112 IPR001005 -
Bisa03g1857 229 SMART sant 68 116 IPR001005 -
Bisa03g1857 229 SMART sant 15 65 IPR001005 -
Bisa03g1857 229 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Bisa03g1857 229 FunFam Myb-related protein 305 73 154 - -
Bisa03g1857 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bisa03g1857 229 MobiDBLite consensus disorder prediction 120 156 - -
Bisa03g1857 229 CDD SANT 18 63 IPR001005 -
Bisa03g1857 229 Gene3D - 71 135 - -
Bisa03g1857 229 MobiDBLite consensus disorder prediction 120 196 - -
Bisa03g1857 229 FunFam Myb transcription factor 16 68 - -
Bisa03g1857 229 MobiDBLite consensus disorder prediction 175 196 - -
Bisa03g1857 229 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1857 Bisa-ChrBisa03 25677247 25680729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1857 10 229 MYB Transcription Factor Family AT3G01530 54.091 3.57e-74 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1857 Myb_DNA-binding 8.2e-15 CL0123