Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1849 ATGATCACGAGGAAGAGGCAGAGCACTGCGAGGTGGGTTGGGTGTGCGTCAGCGACAGCAAAGCAGCGGCGAGGCGCCATTGTGACGGCTAGGTGCCACTATGACAGCGAGGTGCCATTGCGACGGCGAGGTGTGTGCGAGTCACTCTCGAAGTCGTCTGTGGCTGAGTTTAATCCAAACTTCCAAGAGAGCTTCCCTCTGGTTTCTGAGCTTTTCCGAGAAAACCCCCAAAAGCCCCCAGAATTCTCACTCTCTCCCATGGCTCCCTTACAGTCCTCCTCCTTCTCCCACAACCACCCCCTCCCTCCTCCATTATTCCAGACCAATTTGCACCAAAATCCCCAGCTCACCCACAATAAGCCGAACCCGTTTCTTGTGAAGGAGAGTGCTTCTTCCTCCTCCGTCCCAATCTACCCTCAAGACGTGCCTCTCGATGAATCCTTCAGGGATTTTGTGAAAATGGAGACCTTGCATGGTTACAACAATAGTTCAAGCTCCTGGGATTTGTCCCACAAGCTTCCTCTTCCCTCTGGTCCGGCCCTACCACCACCACCGAGGCAATATTACCCTCAAGCCTATGGCTTGTCGCTGAACCCTCGTAGGTCTGGGCTTCAGGAGGAGACACTCTCCTTCATCCTGGTGAATAATGGATGGGACCACAACACTGGAGGTGATCAAGCAGGCCTGAACAACAGGGGCAAGAGGGTCAAAAGTGGCCAGAAGAACACTACCATCATCAAAGGCCAGTGGACACGGGATGAGGACAGGATGTTGGTGCAATTGGTGGACCGCTATGGGATGAAAAAATGGTCTCAAGTTGCCAAAGTTCTAAGTGGGAGGGTGGGAAAGCAGTGTAGGGAACGCTGGCACAACCATCTGCGCCCGGACATTAGGAAGGAAGCATGGAGCGAGGAAGAAGACAAAATCCTCATCGAAGCCCACAAGGAAGTAGGCAACAGGTGGGCCGAGATCGCTCGCAGGCTTCCCGGCAGGACAGAGAACACCATCAAGAACCACTGGAACGCCACCAAGCGTCGCCAGAACGCCAAGAAAGCGAGAAACAAAGCCTCCGCCTCGAGGCCCTCCCTCCTTCAGGAATACATCCGCCAGGTCACCTCCGGCGAGGCAGCCCCCAAGCAGTGGGAGATCAAGGCGGAACAAGCTGACGAGGACTACGACGATGACGTGGACGACAAGGATAAGGACAGGTTCGTCATGATCAACAACAAGGCCGTTAGGGTGCGGTACGAGAGCGCGTCGGACACCAGCTCGGGAGACTGGGACGTTGAATTCTACGTGCAGGACGATGACGTGGCAATTGAGGAGGAAGAAGAGGAGAAGAAGGTTGAGCCCATTGATGTGAATGTTAATAATATTGGAGAAGAGGAGGTTGCTGTGGAGATGAGCAACTTTGTTCGCGAGGAAGACATGAAGAAGGAGATGGACCTGATGGAGATGATATACATCCATTGGAATATTCGTCCGATTGTAGATCCAATGGAAACCCATCAGGAACCTGATGTTGCAAATGCAAACTGTATTGCCAGAGCCAACGTCGAGAAGGTAGTATCGAAGTTGAACGAGCATATGGAAGAAGATAGCAGCGCTGTCAGAGTCAACGAAATCCTTGTGGAGAAGGTAGAGAGAGAGCGTTAA 1656 0.529 MITRKRQSTARWVGCASATAKQRRGAIVTARCHYDSEVPLRRRGVCESLSKSSVAEFNPNFQESFPLVSELFRENPQKPPEFSLSPMAPLQSSSFSHNHPLPPPLFQTNLHQNPQLTHNKPNPFLVKESASSSSVPIYPQDVPLDESFRDFVKMETLHGYNNSSSSWDLSHKLPLPSGPALPPPPRQYYPQAYGLSLNPRRSGLQEETLSFILVNNGWDHNTGGDQAGLNNRGKRVKSGQKNTTIIKGQWTRDEDRMLVQLVDRYGMKKWSQVAKVLSGRVGKQCRERWHNHLRPDIRKEAWSEEEDKILIEAHKEVGNRWAEIARRLPGRTENTIKNHWNATKRRQNAKKARNKASASRPSLLQEYIRQVTSGEAAPKQWEIKAEQADEDYDDDVDDKDKDRFVMINNKAVRVRYESASDTSSGDWDVEFYVQDDDVAIEEEEEEKKVEPIDVNVNNIGEEEVAVEMSNFVREEDMKKEMDLMEMIYIHWNIRPIVDPMETHQEPDVANANCIARANVEKVVSKLNEHMEEDSSAVRVNEILVEKVERER 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1849 551 ProSiteProfiles Myb-like domain profile. 242 293 IPR001005 -
Bisa03g1849 551 CDD SANT 250 293 IPR001005 -
Bisa03g1849 551 SMART sant 246 295 IPR001005 -
Bisa03g1849 551 SMART sant 298 346 IPR001005 -
Bisa03g1849 551 FunFam Transcriptional activator Myb isoform A 246 299 - -
Bisa03g1849 551 CDD SANT 301 344 IPR001005 -
Bisa03g1849 551 Pfam Myb-like DNA-binding domain 250 308 - -
Bisa03g1849 551 Gene3D - 246 298 - -
Bisa03g1849 551 SUPERFAMILY Homeodomain-like 245 340 IPR009057 -
Bisa03g1849 551 PANTHER MYB PROTEIN-RELATED 218 360 - -
Bisa03g1849 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 242 297 IPR017930 -
Bisa03g1849 551 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 298 348 IPR017930 -
Bisa03g1849 551 ProSiteProfiles Myb-like domain profile. 294 344 IPR001005 -
Bisa03g1849 551 Gene3D - 300 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1849 Bisa-ChrBisa03 25569060 25580435 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1849 241 374 MYB Transcription Factor Family AT4G18770 67.910 6.24e-64 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1849 Myb_DNA-bind_6 8.8e-18 CL0123