Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1847 ATGGTCCCCTCACAGTCCTCCTCCCTCAACCAGTACTCTCTCCCTCCTCGATCACCATCACCATTGTTTCAGACCAATTTGCACCATATTCCCCAACTCACTTTCAATAGCCCATACCCACACCCAAACCAGAGCCCGAGCCCGTTTCTTGTGAGGGAAAGTGCTTCTTCCTCCTCTATCCCCTTCTACCCTCAAGGCGTACCTTTTGACGAATCCTTTAGGGATTTCGTGAAAATGGAGGCCTTGCATAGTTACAACACTAGCTCAGGCTTCCGGGATTTGTCCCACAACCACAAGCTTCCTCTTCCGTCTGGTCCAGTCCTACCACCACCACCACCACCGGGGCCATTTTACCCTCAAGCCTATGGCTTGTCATTGAACCCTCCTGGGTCTGGCTTTCACGAGGAGTCGTTCTCCTTCCTGGAGAATAATGGATGGGACCAAAACGCTGGTGGTGATCACGTAGGTGTCGACAACAGGGGGAAGAGGGTTAAAAGTGGTCAGAAGAACACCAACATCATCAAAGGCCAGTGGACACTGGAAGAGGATAGGTTATTACTGCAATTGGTGGACCAATATGGGATGAAAAAATGGTCTCAGGTTGCCAAAGTTCTAAGTGGGAGGGTGGGAAAGCAGTGTAGGGAACGCTGGCACAACCATCTACGCCCGGACATTAGGAAGGAGGCATGGAGCGAGGAAGAAGACAAAATTCTCATCGAAGCCCACAAGGAAGTAGGCAACAGGTGGGCCGAGATCGCTCGCAGGCTTCCCGGCAGGACGGAGAACACCATCAAGAACCACTGGAACGCCACCAAGCGCCGCCAGAACGCCAAGAAAGCGAGAAACAAGGCCTCCACCTCGAGGCCCTCCCTCCTTCAGGAATACATCCGCCAGGTCACCTCCGGCGAGGCAGCCTTCAAGCAGTGGCAAGTCAAGGAGGAACAAGCTGACGAGGACTACAACGATGACGTGGACGACAAGGACAAGGACAGGTTCATCATGATCAACAACAAGGCCGTTAGGGTGCGGTACGAGAGCGCGTCGGACACCAGCTCGGGAGACTGGAACGTTGAATTCTACGTGCAGGACGATGACGTGGCAATTGAGGAGGAAGAAGAGGAGAAGAAGGTTGAGCCCATGGATGTGAATGTTAATAATATTGGAGAAGAGGAGGTAGCTGTGGAGATGAGCAACTTTGTTCGCGAGGAAGACATGAAGGAGGAGATGGACCTGATGGAGATGATATGTGGAAAGCACTAA 1260 0.5246 MVPSQSSSLNQYSLPPRSPSPLFQTNLHHIPQLTFNSPYPHPNQSPSPFLVRESASSSSIPFYPQGVPFDESFRDFVKMEALHSYNTSSGFRDLSHNHKLPLPSGPVLPPPPPPGPFYPQAYGLSLNPPGSGFHEESFSFLENNGWDQNAGGDHVGVDNRGKRVKSGQKNTNIIKGQWTLEEDRLLLQLVDQYGMKKWSQVAKVLSGRVGKQCRERWHNHLRPDIRKEAWSEEEDKILIEAHKEVGNRWAEIARRLPGRTENTIKNHWNATKRRQNAKKARNKASTSRPSLLQEYIRQVTSGEAAFKQWQVKEEQADEDYNDDVDDKDKDRFIMINNKAVRVRYESASDTSSGDWNVEFYVQDDDVAIEEEEEEKKVEPMDVNVNNIGEEEVAVEMSNFVREEDMKEEMDLMEMICGKH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1847 419 CDD SANT 178 221 IPR001005 -
Bisa03g1847 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 226 276 IPR017930 -
Bisa03g1847 419 Gene3D - 228 295 - -
Bisa03g1847 419 ProSiteProfiles Myb-like domain profile. 170 221 IPR001005 -
Bisa03g1847 419 SUPERFAMILY Homeodomain-like 172 268 IPR009057 -
Bisa03g1847 419 SMART sant 226 274 IPR001005 -
Bisa03g1847 419 SMART sant 174 223 IPR001005 -
Bisa03g1847 419 FunFam Transcription factor MYB119 228 293 - -
Bisa03g1847 419 Pfam Myb-like DNA-binding domain 178 235 - -
Bisa03g1847 419 Gene3D - 174 226 - -
Bisa03g1847 419 ProSiteProfiles Myb-like domain profile. 222 272 IPR001005 -
Bisa03g1847 419 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 170 225 IPR017930 -
Bisa03g1847 419 PANTHER MYB PROTEIN-RELATED 153 289 - -
Bisa03g1847 419 FunFam Transcriptional activator Myb isoform A 174 227 - -
Bisa03g1847 419 MobiDBLite consensus disorder prediction 1 23 - -
Bisa03g1847 419 CDD SANT 229 272 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1847 Bisa-ChrBisa03 25554303 25557667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1847 169 302 MYB Transcription Factor Family AT4G18770 67.910 1.12e-64 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1847 Myb_DNA-bind_6 7.6e-19 CL0123