Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1839 ATGGAGACCCCTCTTCTGCCTTGGACAATTTTCGTCTTCTTTCTATCGTTCTGTGTACGCCATGGCCATGCGCTCTCGCGCTTTGATATAATTATACACAATTGCGGGCAGGCCAATGTCCAGAACAGGGATGAGTTTGTGCGCGTCTTTTGGAAAATGAGAAATGAGATGTTGGACGAAATGACTCATGACAAATATTCCTTCAAGGAAGCCGGTGACCCGCCAAATCGTCTCTATCTGTTCTCTCAGTGCATGGATTATCTTACCCAGGCAGAATGTAGAATTTGCTTTGAAAACATTAGTGCCATTCTTTCTGATTGCTTTCCTGCCGCGGGTGGTCGTGTTTATTCCAATGGGTGCTACATTAGGGCTGAGAACTATAATTTCTATAAGGAGGAGTTTAGTCCTGCGGATGTGAAGATGGCATTGAAGGCACCAACTCGAGGAGGCTTCGTATCGATGCAAGAGAAATTGCCTTCAGGTATGGCAGTCCATGGTTTGGCTACCTGTTGGAAGACATTGGACCGAGATAGGTGTTCTGCTTGCCTTGCCAAGGCAGCTAGCGCTTCCTTATCCTGCCTACCATCAACACAGGGTCGTGCGGTCAATTCTGGTTGCTTTCTACGTTATGCTGATTATGACTTCACCAATGATGGAAGAAAGGGAGAAAAAACAGATAATGTAGCAAACTACGTTGCAATTGTTCTTGCCACAATTGCCATCTGTTCATTGGCTATTCTGACTGGATACTATGTTGGACCAAAGAGGAACTTGACCATATTAAAGAGGAACTTGCGATTCATACAATTCAAGTACTCAACATTAGAAAAAGCAACAGATGACTTTAATGAATCTGCTAAGCTTGGTCAAGGAGGATATGGTGAAGTTTACAAGGGAACCTTACCAGATGGTAGAGAAATTGCAATAAAGCGTACACTTTTCAGCGGGAAGAGTGGGACAGAATATGTTTACAATGAAATGGATGTGATCAGTAGAGTTCAACACAAGAATCTGATTCGTTTCCTTGGCTTCTGCTTCACCTCATCTGAAAGCTTTATCATCTATGAATATCTTCCCGGTGGAAGCCTCAGCTACAACCTATTTGGTAGAGACAAAGGAAGAGGCATAGATGCATGGAGGCATTTCCAATCAAAGACTACATCAGAAATCATCGATGAAAGCATGGAGGCTAAAGATGAAGAAGAAATCATAAGAGTCGTCCAGGTGGGACTTTTGTGTACCCAAGAGTTACCATCTTTACGTCCTAACATGTCAGAGGTGACACGAATGCTTAAACAAAAGGATGCTGAACTGCCAGCACCTTCTAAACCTCCTTTTACCAAGGCCTCATTTTTGTTTTAG 1362 0.4325 METPLLPWTIFVFFLSFCVRHGHALSRFDIIIHNCGQANVQNRDEFVRVFWKMRNEMLDEMTHDKYSFKEAGDPPNRLYLFSQCMDYLTQAECRICFENISAILSDCFPAAGGRVYSNGCYIRAENYNFYKEEFSPADVKMALKAPTRGGFVSMQEKLPSGMAVHGLATCWKTLDRDRCSACLAKAASASLSCLPSTQGRAVNSGCFLRYADYDFTNDGRKGEKTDNVANYVAIVLATIAICSLAILTGYYVGPKRNLTILKRNLRFIQFKYSTLEKATDDFNESAKLGQGGYGEVYKGTLPDGREIAIKRTLFSGKSGTEYVYNEMDVISRVQHKNLIRFLGFCFTSSESFIIYEYLPGGSLSYNLFGRDKGRGIDAWRHFQSKTTSEIIDESMEAKDEEEIIRVVQVGLLCTQELPSLRPNMSEVTRMLKQKDAELPAPSKPPFTKASFLF 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1839 453 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 378 448 - -
Bisa03g1839 453 ProSiteProfiles Protein kinase domain profile. 282 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1839 453 Gene3D - 139 215 IPR038408 -
Bisa03g1839 453 Gene3D - 27 129 IPR038408 -
Bisa03g1839 453 Gene3D Transferase(Phosphotransferase) domain 1 355 439 - -
Bisa03g1839 453 ProSitePatterns Protein kinases ATP-binding region signature. 288 310 IPR017441 GO:0005524
Bisa03g1839 453 ProSiteProfiles Gnk2-homologous domain profile. 28 129 IPR002902 -
Bisa03g1839 453 Pfam Salt stress response/antifungal 35 127 IPR002902 -
Bisa03g1839 453 Pfam Salt stress response/antifungal 151 213 IPR002902 -
Bisa03g1839 453 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 236 357 - -
Bisa03g1839 453 SUPERFAMILY Protein kinase-like (PK-like) 260 372 IPR011009 -
Bisa03g1839 453 Gene3D Phosphorylase Kinase; domain 1 253 354 - -
Bisa03g1839 453 Pfam Protein kinase domain 283 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1839 Bisa-ChrBisa03 25398318 25401568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1839 5 452 Receptor kinase-like Gene Family AT4G28670 34.127 7.11e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa03g1839 Pkinase 7.9e-13 CL0016