Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1813 ATGGCATCTTGTTCAAGCTACTCGAATCCTCCATGCGCGGCGTGCAAGTTTCTGAGGAGGAAATGCATGCCGGACTGCATATTCGCTCCGTACTTCCCCCCGGAGGAGCCTCAGAAGTTTGCCAATGTGCACAAGATCTTCGGCGCCAGCAACGTCAGCAAGCTCCTCCAGGAGGTGATGCCGCATCAGCGAGAGGACGCCGTCAACTCTCTGGCCTACGAAGCCGAGGCCAGAATTAAAGATCCCGTGTATGGCTGTGTAGGCGCCATTTCGGTGCTCCAGCGCCAGCTCATCAGGCTCCAGAAGGAGCTCGATGCTACCAATGCGGATTTGATCCGCTACACCTGCACTAACGACATCCCCCCCTCTGCTGCTGCCACGTCCGCAAGGACCGACGCCGGCGATATTGACGGAGCTGCTCATGCTGCTTCCTCTCTTCCTCATCATCACTCTCACTCTCCTCCTGGCTTTTATTATCCATCTCCTTGGAGTAACTATTAA 501 0.5569 MASCSSYSNPPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLQEVMPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQLIRLQKELDATNADLIRYTCTNDIPPSAAATSARTDAGDIDGAAHAASSLPHHHSHSPPGFYYPSPWSNY 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1813 166 Coils Coil 90 110 - -
Bisa03g1813 166 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Bisa03g1813 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 139 - -
Bisa03g1813 166 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1813 Bisa-ChrBisa03 24790863 24791363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1813 5 114 AS2 family AT3G27650 83.636 9.76e-69 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa03g1813 LOB 2.4e-42 No_clan