Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1804 ATGGTAAAGCGCCTACGAGAAAATTTATATACAGCTCTTCTTCTTCAGGACATATCCTATTTTGATAGAGAACAAGTTGGTGACTTGACAAGCAGGCTTTCAGCAGATTGCCAACGATTATCTTATGTCATAGGAAATGATCTTCATTTGATATTACGCAATAGTTTACAGGGAACAGGAGCAGTAATAAATTTGCTGACTTTATCATGGCCTCTAGCATTGTCTAGCTTGGTGATTTGCTCTATGATATCTGCAATTTTCCTGGTTTATGGCCGGTATCAAAGAAAAGCAGCAGAGTTGACCCAAGATTTTACAGCTAGTGCCAATGAAGTAGCACAGGAAACACTTTCTTTGGTAAGAACAGTCCGAGTCTATGGCACAGAAGTAGAAGAATTAGGAAGGTACAAGCAATGGCTGCAGAGATTAGCATTTGTAAACACTCGGGAGAGTTTGGCTTATGGTGGTTTCTGTATGAGTTTTAACATCCTTTACCGTTCAACTCAGATATTTGCAGTGCTGTTAGGAGGGATCTTATCATCATTACTGCAGTCCATTGGAGCATGTGAAAAAGTTTTCCGAATGATGAATCTTTTGCCCAGTGATCAATTCTTATCAAAAGGAGTGAAGTTGCAGAGGTTGATCGGACATATTCAGTTTGTGGATGTATCATTTTGTTATCCTACAACTACAAGGACCACGATGCCTGTTCTAGAACGCTTAAACTTCTGTGTAGGAGCAAATGAAGTGATTGCAATAGTTGGTCTGAGTGGTAGTGGGAAAAGCACATTACTCAACCTTTTACTTCGTCTATACGAGCCAAGTAATGGTCAGATTTATATTGATGGATTCCCTCTCAAAGGGTTGGACATCAGATGGCTGAGACATAACATTGGATATATTGCACAGGAACCACATCTCTTTCACATGGACATCAAGTCAAACATAAAATATGGTTGTCCAAGGGACATCAAACAGGAAGACATTGAACGGGCAGCAAAGCAGGCCTATGCTCATGACTTCATTTCTTTGCTTCCCAATGGCTATGAAACCATTGTTGATGATAATTTACTGAGTGGGGGACAAAAGCAACGAATTGCTATCGCTAGAGCCATTCTCAGGGACCCAGTTATTTTGATACTTGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCATTATATCAAAGAGGCGGTGCATGCATTAAAACGTGAATCTAAGGCAAGAACCATCATTATCATAGCACATAGGCTTTCTACACTAAAAGCTGCTGATAGGATCTTCGTGATGGATGGCGGTCGCATCATTGAGATTGGTAACCACGAAGAACTTTTACTCAAGGATGGACTCTATGCAAAACTGTATAAAGTTCAAACAGAAATCTTGACCTGA 1392 0.403 MVKRLRENLYTALLLQDISYFDREQVGDLTSRLSADCQRLSYVIGNDLHLILRNSLQGTGAVINLLTLSWPLALSSLVICSMISAIFLVYGRYQRKAAELTQDFTASANEVAQETLSLVRTVRVYGTEVEELGRYKQWLQRLAFVNTRESLAYGGFCMSFNILYRSTQIFAVLLGGILSSLLQSIGACEKVFRMMNLLPSDQFLSKGVKLQRLIGHIQFVDVSFCYPTTTRTTMPVLERLNFCVGANEVIAIVGLSGSGKSTLLNLLLRLYEPSNGQIYIDGFPLKGLDIRWLRHNIGYIAQEPHLFHMDIKSNIKYGCPRDIKQEDIERAAKQAYAHDFISLLPNGYETIVDDNLLSGGQKQRIAIARAILRDPVILILDEATSALDSESEHYIKEAVHALKRESKARTIIIIAHRLSTLKAADRIFVMDGGRIIEIGNHEELLLKDGLYAKLYKVQTEILT 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1804 463 ProSitePatterns ABC transporters family signature. 357 371 IPR017871 GO:0005524|GO:0016887
Bisa03g1804 463 PANTHER ABC TRANSPORTER B FAMILY 178 456 IPR039421 -
Bisa03g1804 463 FunFam Multidrug ABC transporter ATP-binding protein 209 461 - -
Bisa03g1804 463 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 178 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1804 463 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 217 457 IPR003439 GO:0005524
Bisa03g1804 463 SMART AAA_5 246 434 IPR003593 GO:0016887
Bisa03g1804 463 Pfam ABC transporter transmembrane region 1 179 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Bisa03g1804 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 458 IPR027417 -
Bisa03g1804 463 Pfam ABC transporter 237 385 IPR003439 GO:0005524
Bisa03g1804 463 Gene3D - 207 459 IPR027417 -
Bisa03g1804 463 Gene3D ABC transporter type 1, transmembrane domain 1 175 IPR036640 GO:0005524|GO:0016020
Bisa03g1804 463 Gene3D ABC transporter type 1, transmembrane domain 178 460 IPR036640 GO:0005524|GO:0016020
Bisa03g1804 463 SUPERFAMILY ABC transporter transmembrane region 2 199 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1804 Bisa-ChrBisa03 24651766 24657490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1804 4 458 Calmodulin-binding Proteins AT2G36910 36.162 1.27e-77 261