Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1798 ATGGAGTCACCTGTTAATGGAGTTGAGTCTTTATCAGAGGTTCAGAATTCAGTTTCTGCACTAGATCACGACCCTCCTTCAACATCTGAAACTCCCAGGCCTTCTCGGCCTCCCTTAAGAGCATCATCAAGAAATCACGTGGCTTCTTCCTCATCCTATCTCAGTCCTAACCATGGAATTAAGATTAATCAAAAGCATCCCTATCAGGAGGCCAACCACGTGCAGCATCAACAACTACCAAATATGGCAAAGCAATATCACAGTTCTAGTGAAAAATCTGGACAAACTTGTTCAGGGAAGAGTACCTCTACGATGGAAACAAAGACTTCTGATTCAAATGGCACATTAGCCCCTTCTAAAGGAGTTGATGATCAAACAAAGAGTTGCTCTCGGTCAGAAGTTACTTTCTGTCAAAGTCCTCACAACAACTTGTATTCTACCACAGTCTTTTCAGAAGCCAAACAGAGTTTCGCCAATACTGAAGTCAGTGAGTGTGTTAGCGTTGAAAAGTCTGGTGAAAGTGGTGAAGTCGCTAACTCTTGTGACTTTAACGAGAGCAGGAAGACCAGCATCTGTAGAGGGAGTACTGGGAGTGATGTGAGTGATGAGAGTAGTTCCAGTAGTTTGAGCAATGCTTTGTATAAACCCCACAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCTGTCCGAGCTCGCGATGGGATGCTGGAAATGAGGCATTTCAGGTTGTTGAAGAAGTTGGGATGTGGAGACATTGGAAGTGTTCATCTTGCAGAGTTGAGTGGCACAAGGACCTGTTTTGCAATGAAGATTATGAACAAAACAGAGCTGGCAAGTCGGAAGAAGCTTCTGAGGGCTCAGACAGAGAGAGAGATATTGCAGTGTCTGGATCACCCTTTTTTACCCACATTGTATACGCATTTTGAGACAGAGACATTCTCTTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTGAGGCAAAGACAACCTAGGAAGTATTTTTCAGAGCATGCTGCCAGGTTTTATGTAGCTGAAGTTCTTCTTGCTTTGGAGTACCTGCACATGCTTGGGATCATCTACAGAGACCTTAAACCAGAGAACGTGCTGGTGAGAGAAGACGGTCACATTATGCTCTCAGACTTCGACCTCTCTCTTAGATGCGCCGTGAGTCCAACTCTAGTAAAATCCTCAAACTTAACCGTGGACGCAAGAACCTCAGGATACTGCATTCAACCCACCTGCGTGATGCAGCCAAATTGCATCCAACCTTCGTGCTTCACACCCCGCTTCCTATCAAGCAAAGCCAAGAAAGACAAAAAGTCCAAACCGAAGACCGAGACGCATCACCAGGTGAGCCCTCTCCCCGAGCTCATGGCCGAGCCCACAAACGCCCGATCCATGTCCTTCGTGGGCACACACGAGTACCTAGCCCCCGAAATCATCAAAGGCGAAGGCCATGGCAGTGCGGTGGACTGGTGGACGTTCGGGATATTCCTGTACGAACTCTTGTTCGGAAGAACACCGTTTAAGGGGTCGGCGAACAGAGCGACTCTGTTCAACGTGGTTGGGCAGCCACTGAGGTTTCCAGAATCACCGACTGTTAGTTTCGCTGCGAGGGATCTGATCAGGGGTTTACTCGTGAAAGAGCCTCAGCATCGTCTGGCGTATCGGCGTGGAGCTACGGAGATCAAACAGCACCCATTCTTCCAGAACGTGAATTGGGCGCTGATACGGTGTGCGAATCCTCCGGAGGTGCCGAGGATGCTGGCTCTGAAGGAAATCGTGGCTGAAAAAGTGGCTGGTGATGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1863 0.4761 MESPVNGVESLSEVQNSVSALDHDPPSTSETPRPSRPPLRASSRNHVASSSSYLSPNHGIKINQKHPYQEANHVQHQQLPNMAKQYHSSSEKSGQTCSGKSTSTMETKTSDSNGTLAPSKGVDDQTKSCSRSEVTFCQSPHNNLYSTTVFSEAKQSFANTEVSECVSVEKSGESGEVANSCDFNESRKTSICRGSTGSDVSDESSSSSLSNALYKPHKANDIRWEAIQAVRARDGMLEMRHFRLLKKLGCGDIGSVHLAELSGTRTCFAMKIMNKTELASRKKLLRAQTEREILQCLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPRKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNLTVDARTSGYCIQPTCVMQPNCIQPSCFTPRFLSSKAKKDKKSKPKTETHHQVSPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRMLALKEIVAEKVAGDVKPSGNYLDIDFF 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1798 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Bisa03g1798 620 FunFam Serine/threonine-protein kinase D6PK-like 240 325 - -
Bisa03g1798 620 MobiDBLite consensus disorder prediction 1 63 - -
Bisa03g1798 620 CDD STKc_phototropin_like 240 592 - -
Bisa03g1798 620 MobiDBLite consensus disorder prediction 82 126 - -
Bisa03g1798 620 Gene3D Phosphorylase Kinase; domain 1 234 327 - -
Bisa03g1798 620 PANTHER FLIPPASE KINASE 1-RELATED 77 593 - -
Bisa03g1798 620 Gene3D Transferase(Phosphotransferase) domain 1 328 591 - -
Bisa03g1798 620 MobiDBLite consensus disorder prediction 1 59 - -
Bisa03g1798 620 FunFam serine/threonine-protein kinase D6PK-like 469 592 - -
Bisa03g1798 620 ProSiteProfiles Protein kinase domain profile. 242 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1798 620 SMART serkin_6 242 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1798 620 Pfam Protein kinase domain 471 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1798 620 Pfam Protein kinase domain 243 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1798 620 SUPERFAMILY Protein kinase-like (PK-like) 220 592 IPR011009 -
Bisa03g1798 620 MobiDBLite consensus disorder prediction 189 211 - -
Bisa03g1798 620 FunFam serine/threonine-protein kinase D6PK-like 326 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1798 Bisa-ChrBisa03 24614984 24618366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1798 147 620 AGC Kinase Gene Family AT5G47750 71.515 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa03g1798 Pkinase 6e-37 CL0016