Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1750 ATGGCACGAGCCGAATCAACCCAAGGGGCACTACGGGAACGCGTTAGTGCTGGGGTGTGCGGAGAGCAAGGCAAAGGCATTAGCACAGAAAGGTCTCGGGCATGTGGACCCTACGAGCGTGCTGCAACCGCCGATGAGGCTGGAGCATCAATGCTTCGAGAAGAAACCTGGGGTATTTGTCATGACAAGGACATGCAGGTCACTGTTGCCTTCAATCACTTCGGAGAAGGGTTGGTGCAGAGGATGCCGAGGTGCAGGCACGGGTATTTTCATGTGGTGAACAACGATTACAGTGAGTGGGAGATGTATGCGATTGGAGGGAGTGCTGGGCCCACTATTAATAGTGAAGGGAATAGGTTTGTGGCTCCGAATAATGGGAACGCCAAAGAAGTGACGAAGCATGAGCTTGCTGCAAAGAGTGAGTGGATGAAGTGGAACTGGAGATCGGAGGGGGATCTCTTCTTGAACGGAGCGTTCTTCACTCCTTCTGGTGCTGCTTCTTCTTCCACCTATGCTAGGGCTTCCAGTCTCAGTGCCAGGCCTTCTTCTCTTGTTGCTTCTATTACCAGTAAAGCTGGCGCACTTACCTGCAGAAGCGGCAACCCTTGCTGA 612 0.5294 MARAESTQGALRERVSAGVCGEQGKGISTERSRACGPYERAATADEAGASMLREETWGICHDKDMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYSEWEMYAIGGSAGPTINSEGNRFVAPNNGNAKEVTKHELAAKSEWMKWNWRSEGDLFLNGAFFTPSGAASSSTYARASSLSARPSSLVASITSKAGALTCRSGNPC 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1750 203 PRINTS Pollen allergen Amb family signature 81 100 IPR018082 -
Bisa03g1750 203 PRINTS Pollen allergen Amb family signature 103 122 IPR018082 -
Bisa03g1750 203 PRINTS Pollen allergen Amb family signature 174 197 IPR018082 -
Bisa03g1750 203 PRINTS Pollen allergen Amb family signature 145 169 IPR018082 -
Bisa03g1750 203 Pfam Pectate lyase 65 120 IPR002022 -
Bisa03g1750 203 SUPERFAMILY Pectin lyase-like 61 203 IPR011050 -
Bisa03g1750 203 Gene3D - 45 196 IPR012334 -
Bisa03g1750 203 SMART amb_all 1 126 IPR002022 -
Bisa03g1750 203 PANTHER PECTATE LYASE 18-RELATED 61 201 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1750 Bisa-ChrBisa03 23925436 23928450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1750 62 203 Polysaccharide Lyase AT4G13710 74.648 1.14e-74 230