Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1749 ATGCCGAGGTGCAGGCACGGGTATTTTCATGTGGTGAACAACGATTACAGTGAGTGGGAGATGTATGCGATTGGAGGGAGTGCTGAGCCTACTATTAATAGTGAAGGGAATAGGTTTCTGGCTCCGAATAATGGGAACGCCAAAGAAGTGACGAAGCATGAGGATGCTGCAAGGAGTGAGTGGATGAAGTGGAACTGGAGATCGGAGGGGGATCTCTTCTTGAACGGAGCGTTCTTCACTCCTTCTGGTGCTGCTTCTTCTTCCACCTATGCTAGGGCTTCCAGTCTCAGCGCCAGGCCTTCTTCTCTTGTTGCTTCTATTACGAGTAAAGCTGGGGCCCTTACCTGCAGAAGCGGCAACCCTTGCTGA 369 0.5122 MPRCRHGYFHVVNNDYSEWEMYAIGGSAEPTINSEGNRFLAPNNGNAKEVTKHEDAARSEWMKWNWRSEGDLFLNGAFFTPSGAASSSTYARASSLSARPSSLVASITSKAGALTCRSGNPC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1749 122 PRINTS Pollen allergen Amb family signature 93 116 IPR018082 -
Bisa03g1749 122 PRINTS Pollen allergen Amb family signature 64 88 IPR018082 -
Bisa03g1749 122 PRINTS Pollen allergen Amb family signature 22 41 IPR018082 -
Bisa03g1749 122 PANTHER PECTATE LYASE 18-RELATED 1 120 IPR045032 GO:0030570
Bisa03g1749 122 Gene3D - 1 115 IPR012334 -
Bisa03g1749 122 SUPERFAMILY Pectin lyase-like 1 122 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1749 Bisa-ChrBisa03 23900123 23900491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1749 1 122 Polysaccharide Lyase AT4G13710 73.770 8.32e-63 196