Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1747 ATGCTTCGACCCGCACGACTCCTAAGAATTAGGCAGAAAGCAGCAGCTTCAGAAAATGTAATACACCTAAATACCAGAACTTCTGAATTGTTTTGTGTCAACTTAGCACGTGGAGCATCAATGCTTCCAGAAGAAATCTGGGATATTTATCATGACAAGGACATGCAGGTCACTGTGGCCTTCAATCACTTCGGAGAAGGATTGGTGCAGAGGATGCCGAGGTGCAGGCACGGGTATTTTCATGTGGTGAACAACGATTACAGTGAGTGGGAGATGTATGCGATTGGAGGGAGTGCTGAGCCTACTATTAATAGTGAAGGGAATAGGTTTCTGGCTCCGAATAATGGGAACGCCAAAGAAGTGACGAAGCATGAGGATGCTGCAAGGAGTGAGTGGATGAAGTGGAACTGGAGGTCGGAGGGGGATCTCTTCTTGAACAGAGCGTTCTTCACTCCTTCTGGTGCTGCTTCTTCTTCCACCTATGCTAGGGCTTCCAGTCTCAGTGCGAGGCCTTCTTCTCTTGTTGCTTCTATTACCAGTAAAGCTGGTGCACTTACCTGCAGAAGCGGCAACCCTTGCTGA 582 0.4811 MLRPARLLRIRQKAAASENVIHLNTRTSELFCVNLARGASMLPEEIWDIYHDKDMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYSEWEMYAIGGSAEPTINSEGNRFLAPNNGNAKEVTKHEDAARSEWMKWNWRSEGDLFLNRAFFTPSGAASSSTYARASSLSARPSSLVASITSKAGALTCRSGNPC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1747 193 Gene3D - 37 186 IPR012334 -
Bisa03g1747 193 Pfam Pectate lyase 55 110 IPR002022 -
Bisa03g1747 193 SUPERFAMILY Pectin lyase-like 51 193 IPR011050 -
Bisa03g1747 193 SMART amb_all 3 116 IPR002022 -
Bisa03g1747 193 PANTHER PECTATE LYASE 18-RELATED 51 191 IPR045032 GO:0030570
Bisa03g1747 193 PRINTS Pollen allergen Amb family signature 71 90 IPR018082 -
Bisa03g1747 193 PRINTS Pollen allergen Amb family signature 93 112 IPR018082 -
Bisa03g1747 193 PRINTS Pollen allergen Amb family signature 135 159 IPR018082 -
Bisa03g1747 193 PRINTS Pollen allergen Amb family signature 164 187 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1747 Bisa-ChrBisa03 23849627 23851374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1747 52 193 Polysaccharide Lyase AT4G13710 74.648 3.37e-75 231