Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1746 ATGCAAGAGGGGCGCAGTGTAGAGATGTGCAACAACAACACTCCTCCTTCTTCCTCCGATCTCAAAACAAGAGACTCTGCTATTTCAGGACTCACGCCACCTCGCCGGAAAAACAGAACCAAGACCAGGAAGCCCAAGTTCCTGAGTCTCCGCCTCCAGCTTTCTCCCAACCACCACAAGCCCTCGTCTTCTCCGTCGCCGGACGAGATGACCCAGCAGCAACAGCTGAACCTCTTCCCCTTACACCCTGAGAATCTGGTGGACGACAAGGATATGATGCAAGACGACCACAACGTGGCTCTGCTCTTCTCCTCCCACGGCCCCGCCACGCTCAACGGCCTCCTCGAGCAGGAATCCACCACCACCACCGCCACGACGGAGGAGGAGGAGGGTCTGACCAGGTGCCCCGTGGACGACCGACATGGGACCTCCCTGCTACGGAAGGCCATGAAGCGGCGGAACGACGAGGAGGAGGAGGAGGAGAGGTGGGTGTGTTACTCGGAGGTGACCAGTTATTGCAGCGCCACTACGACGGAGAGCACCGCCACGACGACAACGTTTGGGTTGCTGTCGTTGAAGCTGGATTACGAGGGCATATTAAATGCTTGGTCTGATAAAGGCCCTCTTTACGTCGCAGGGGAGACCCCACACTCTATCCCTCCCTTCCTTCATCATGCCCTTCCCTTTCACGATCCCCAAGTAGTATGGGGGAACAGTGGAAGTGTGGTAGAGAAGGGAAGGGAAGAAGGAGAAGAGGAGAGAGGAAAGAGCGAGAAGAAGATGAAAGGGAAGGAAGAAGAAGGATGGAAGAAGGGGCAAAGAGAAGCAAGTGTGTTAAGATACAAGGAGAAAAGGCAAAGCAGGCTTTTCTCTAAGCGAATTCGCTATGAGGTTCGTAAGCTCAACGCAGAGAAACGCCCTAGGATGAAGGGACGATTTGTGAAGAGGGACTGA 954 0.5503 MQEGRSVEMCNNNTPPSSSDLKTRDSAISGLTPPRRKNRTKTRKPKFLSLRLQLSPNHHKPSSSPSPDEMTQQQQLNLFPLHPENLVDDKDMMQDDHNVALLFSSHGPATLNGLLEQESTTTTATTEEEEGLTRCPVDDRHGTSLLRKAMKRRNDEEEEEERWVCYSEVTSYCSATTTESTATTTTFGLLSLKLDYEGILNAWSDKGPLYVAGETPHSIPPFLHHALPFHDPQVVWGNSGSVVEKGREEGEEERGKSEKKMKGKEEEGWKKGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1746 317 MobiDBLite consensus disorder prediction 1 26 - -
Bisa03g1746 317 MobiDBLite consensus disorder prediction 242 273 - -
Bisa03g1746 317 ProSiteProfiles CCT domain profile. 274 316 IPR010402 GO:0005515
Bisa03g1746 317 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 11 317 - -
Bisa03g1746 317 MobiDBLite consensus disorder prediction 55 73 - -
Bisa03g1746 317 MobiDBLite consensus disorder prediction 244 273 - -
Bisa03g1746 317 MobiDBLite consensus disorder prediction 119 139 - -
Bisa03g1746 317 MobiDBLite consensus disorder prediction 1 73 - -
Bisa03g1746 317 Pfam CCT motif 274 316 IPR010402 GO:0005515
Bisa03g1746 317 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1746 Bisa-ChrBisa03 23838437 23840367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1746 189 316 C2C2-CO-like Transcription Factor Family AT1G25440 43.846 7.35e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa03g1746 CCT 2.9e-18 CL0281