Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1736 ATGGTGGGGAGGCAGCCTTGTTGCGATAAGGTTGGTTTGAAGAGAGGTCCTTGGACTATCGAGGAAGATCGCAAACTCATCAACTTCATCCTCAACAATGGCATCCATTGTTGGCGTATGGTCCCCAAGCTTGCAGGTCTGCTAAGATGTGGGAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGGCCAGACCTCAAGAGAGGTGACTTCACAGAGGTGGAAGAGGATGAAATTATTCAGCTACATTCACGACTTGGTAACAGGTGGTCTAAGATTGCTGCACATTTTCCTGGGAGGTCAGACAACGAGATCAAGAACCATTGGAACGCAAGAATCAAGAAGAGGCTGAAGCAGCTTGGTGTGGACCCTGTGACCCACAAGCCAATTCAACAGACAAACCAATTGCAGCCAAGTAGTTCTTCTTCCAAAGGGTCTGAACAAAATATGGAGATAATGAAGTCCTTGGACAGCACAGAAGAAAAAAGAGAAGACAACAAGGTGGCTTGGGATGATACTACCTCTGATATTATAAACAACAAAGAAATATTGTGGTCAGAGTTAGACTCTAGTCTTTGGATCATGGATGAGCCAAGAAACAAACACCAGTGCCATTAG 618 0.4482 MVGRQPCCDKVGLKRGPWTIEEDRKLINFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGDFTEVEEDEIIQLHSRLGNRWSKIAAHFPGRSDNEIKNHWNARIKKRLKQLGVDPVTHKPIQQTNQLQPSSSSSKGSEQNMEIMKSLDSTEEKREDNKVAWDDTTSDIINNKEILWSELDSSLWIMDEPRNKHQCH 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1736 205 Gene3D - 69 169 - -
Bisa03g1736 205 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 170 - -
Bisa03g1736 205 Gene3D - 12 68 - -
Bisa03g1736 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa03g1736 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Bisa03g1736 205 FunFam MYB transcription factor 69 130 - -
Bisa03g1736 205 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Bisa03g1736 205 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Bisa03g1736 205 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Bisa03g1736 205 FunFam MYB transcription factor 12 68 - -
Bisa03g1736 205 SMART sant 14 64 IPR001005 -
Bisa03g1736 205 SMART sant 67 115 IPR001005 -
Bisa03g1736 205 MobiDBLite consensus disorder prediction 127 167 - -
Bisa03g1736 205 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Bisa03g1736 205 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa03g1736 205 MobiDBLite consensus disorder prediction 127 153 - -
Bisa03g1736 205 CDD SANT 17 62 IPR001005 -
Bisa03g1736 205 CDD SANT 71 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1736 Bisa-ChrBisa03 23693400 23694191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1736 2 150 MYB Transcription Factor Family AT5G16600 67.785 4.70e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa03g1736 Myb_DNA-binding 2.1e-11 CL0123