Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1733 ATGGTGAGCGAAGAACAAAGACGCACACCGCAAAATCAAAAGAACCCAACAAGATTAACAAACCCATTGGAAAGTGGCGAAAACTTGAGCAGTATTTTCAGCCCTCGATTCAAATCTGCGGCTGCGATGGCCGGTTGGGATGAAGAGGCCCTGCTCTTGGCCAGCCTCGTCGTCGAAGACACCCCCGACAGAGATTTCAAGCACAAGAAACGCTGTGATCTCAACTTCAAGACCCCACCCACTAATTCCAGAAGGAAACGCAGAACTCAGAGGAGTCCACAACCAATCCCAGTGGCTGTTCTCGACCTCGACGAAGAAGAAACTCCCAGAAAGGAGAGTGGGAAAAATAAAAAAGAAGACAAAGCTAGTGCTAACGAAGACAGTAAAATAGGAGGGGATGATAATATTTCGACCCAAAAGAGCTCTAGTTCTTCTTCTTTTTCTTCTTCGAGTTCTCCTCTCCCCTGCGTTGATAAACTCAGAGAGGAGCTTTCCTGCGCAATTTGTTTGGAGATATGCTTTGAACCAAGTACCACTCCTTGTGGACACAGCTTTTGTAGAAAATGCCTTCGATCTGCTGCGGATAAATGTGGTAAAAAGTGCCCAAAGTGCAGACAATTGATAAGCAATGGACGATCTTGCAGCGTGAACACAGTTCTTTGGAACACAATACAGCTCCTTTTTCCCAAGGAAGTGGAAGCCAGGAAAGCGGCAGGCGCCTTGAACAATCGAGAAGCCCAACAACAGCACGTGAGTCCTCAAACAGCATTCTACAGCAATCTGAGGAATCGAAGTACTCAAACATTAGGGGCATTAAGAGCAACAGGTACAGCAAGTTCGAGGAGAAGGGGAATCACAACAAGCCAGGATGAGGACGATGCTGCATTGGCCAGAAGGATGCAGAGAGAAACTGAAGAGCAAAGGCATCAAGCCCCATCATCGTCTTCAAGAGGGAGGACAAGAAGAGGCTCGATCACGAGCCAAGATGAGGATGCTGCTTTGGCTCTGAGGTTGCAGAGAGAAGAGTTCATGCAGGCTTTTAGGGAAAGCCAAGTACAGGGACAGTCCAGCAGAAGTGTGTCTTTGGCCAGAGCAAATTTGAGGGCCATGGCATCTAGAGCCATCGATATTAGAATTAGAGATCGAAGAATATGA 1155 0.4736 MVSEEQRRTPQNQKNPTRLTNPLESGENLSSIFSPRFKSAAAMAGWDEEALLLASLVVEDTPDRDFKHKKRCDLNFKTPPTNSRRKRRTQRSPQPIPVAVLDLDEEETPRKESGKNKKEDKASANEDSKIGGDDNISTQKSSSSSSFSSSSSPLPCVDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGKKCPKCRQLISNGRSCSVNTVLWNTIQLLFPKEVEARKAAGALNNREAQQQHVSPQTAFYSNLRNRSTQTLGALRATGTASSRRRGITTSQDEDDAALARRMQRETEEQRHQAPSSSSRGRTRRGSITSQDEDAALALRLQREEFMQAFRESQVQGQSSRSVSLARANLRAMASRAIDIRIRDRRI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1733 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 235 IPR013083 -
Bisa03g1733 384 MobiDBLite consensus disorder prediction 273 328 - -
Bisa03g1733 384 MobiDBLite consensus disorder prediction 103 128 - -
Bisa03g1733 384 ProSiteProfiles Zinc finger RING-type profile. 166 205 IPR001841 -
Bisa03g1733 384 SUPERFAMILY RING/U-box 158 229 - -
Bisa03g1733 384 Pfam Zinc finger, C3HC4 type (RING finger) 166 204 IPR018957 GO:0046872
Bisa03g1733 384 ProSitePatterns Zinc finger RING-type signature. 181 190 IPR017907 -
Bisa03g1733 384 MobiDBLite consensus disorder prediction 285 312 - -
Bisa03g1733 384 SMART ring_2 166 204 IPR001841 -
Bisa03g1733 384 MobiDBLite consensus disorder prediction 71 153 - -
Bisa03g1733 384 PANTHER UNCHARACTERIZED 327 375 - -
Bisa03g1733 384 MobiDBLite consensus disorder prediction 130 153 - -
Bisa03g1733 384 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1733 113 209 C3H Transcription Factor Family AT2G42030 29.592 2.46e-07 50.4