Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1711 ATGCATGTTTTAGGTTTTAACAGAGTTTATGACAATCTGTCCCTCATAGTTGATCATGCTTTGCTAATGGTTGCTTTATACTTTCCTCAGACAAATTCCCTTTTGTCATCCATCATCACAAAGAATAATGATTCTGGCTCTACTGGCGGAAGGTCCTTAAGAGTACTTGCATTAATTGGAGCAGGTGTCTCAGGGTTTTTGAGTTTTGCAACAACTGCATCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAGCTATCCATGGCCTCATGCAGGCATCCTCAGTTCATATGATCATGCTTCGATTCGCCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCCTGCCATTCTATGTCTCTGGTATCATACCGTGATTTGGTTGGTGTCGCTTATACAGAAGAAGAGGTAAAGGGAATGGCAGCAGAGATTGAGGTGGTTGATGGCCCTAACGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGCGATCGCTTTCCTCAGCCATATGCAAATGAAGCTGCTGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCTGATCTAAGTCTTATAACCAAAGCCCGCCACAATGGTCAGAACTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTGCACTATAATCCTTATTTTCCTGGTGGAGCAATAGCCATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCTGCCACAGAAGCTCAGATGGGAAAAGATGTTGTGTCATTCTTAACTTGGGCTGCTGAACCTGAGATGGAAGAGAGAAAACTGATGGGTTTCAAATGGATTTTTGTACTATCGCTGGCATTGCTTCAAGCTGCTTATTTTCGTCGATTGAGGTGGTCGGTTCTAAAGTCTCGCAAGCTGGTCGTTGATGTTGTCAACTAG 957 0.4431 MHVLGFNRVYDNLSLIVDHALLMVALYFPQTNSLLSSIITKNNDSGSTGGRSLRVLALIGAGVSGFLSFATTASADEAEHGLECPSYPWPHAGILSSYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEEEVKGMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1711 318 Gene3D - 274 317 - -
Bisa03g1711 318 FunFam Cytochrome c1, heme protein 78 273 - -
Bisa03g1711 318 ProSiteProfiles Cytochrome c family profile. 101 208 IPR009056 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 234 253 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 152 172 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 107 126 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 254 273 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 87 106 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 273 288 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 185 209 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 PRINTS Cytochrome C1 signature 223 234 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 Pfam Cytochrome C1 family 89 305 IPR002326 GO:0009055|GO:0020037
Bisa03g1711 318 SUPERFAMILY Cytochrome c 82 272 IPR036909 GO:0009055|GO:0020037
Bisa03g1711 318 Gene3D - 78 273 IPR036909 GO:0009055|GO:0020037
Bisa03g1711 318 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 273 317 IPR021157 -
Bisa03g1711 318 FunFam Cytochrome c1, heme protein, mitochondrial 274 318 - -
Bisa03g1711 318 PANTHER CYTOCHROME C1 43 315 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1711 Bisa-ChrBisa03 23362867 23365082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1711 42 318 Chloroplast and Mitochondria Gene Families AT3G27240 88.448 1.79e-171 476