Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1709 ATGATGGCTGGAGGTGTTATTCTACAGTTATTGAGGAGGAAACTCCAGTCTCAATCTACTACCTCTTCATTCTTGTCATCCATCATCACGAAGAAAGATGATGCTGGTTCTACTGGCAGCAGATCCTTAAGAGCACTTGCATTAATTGGTGGTGGTGTCTCAGGGTTTTTGAGTTTTGCAACAACTGCATCAGCTGATGAGGCTGAGCATGGCCTGGAATGTCCAAGCTATCCGTGGCCTCATGCGGGCATCCTCAGTGCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACACAAGTCTGTGCTTCTTGCCATTCTATGTCTTTGGTATCATACCGTGATTTGGTTGGTGTCGCTTATACAGAAGAAGAGGTAAAGGGAATGGCAGCGGAGATTGAGGTGGTTGATGGCCCTAACGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGCGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGCCACAATGGTCAGAACTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGATTACACTATAATCCTTATTTTCCTGGTGGAGCAATCGCCATGCCTAAAATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACCCCTGCCACAGAATCTCAGATGGGAAAAGATGTCGTGGCATTCTTAGCTTGGGCTGCTGAACCTGAGATGGAGGAGAGAAAACTGATGGGCTTCAAATGGATTTTTGTGTTGTCGCTGGCATTGCTTCAAGCTGCATATTTCCGTCGATTGAGGTGGTCAGTTCTAAAGTCTCGCAAGCTCGTTGTTGATGTTGTCAACTAG 927 0.4574 MMAGGVILQLLRRKLQSQSTTSSFLSSIITKKDDAGSTGSRSLRALALIGGGVSGFLSFATTASADEAEHGLECPSYPWPHAGILSAYDHASIRRGHQVYTQVCASCHSMSLVSYRDLVGVAYTEEEVKGMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVAFLAWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVVDVVN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1709 308 Pfam Cytochrome C1 family 79 295 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 Gene3D - 68 263 IPR036909 GO:0009055|GO:0020037
Bisa03g1709 308 Gene3D - 264 307 - -
Bisa03g1709 308 PANTHER CYTOCHROME C1 32 305 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 97 116 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 142 162 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 224 243 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 263 278 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 175 199 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 213 224 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 244 263 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 PRINTS Cytochrome C1 signature 77 96 IPR002326 GO:0009055|GO:0020037
Bisa03g1709 308 FunFam Cytochrome c1, heme protein, mitochondrial 264 308 - -
Bisa03g1709 308 FunFam Cytochrome c1, heme protein 68 263 - -
Bisa03g1709 308 ProSiteProfiles Cytochrome c family profile. 91 261 IPR009056 GO:0009055|GO:0020037
Bisa03g1709 308 SUPERFAMILY Cytochrome c 72 262 IPR036909 GO:0009055|GO:0020037
Bisa03g1709 308 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 263 307 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1709 Bisa-ChrBisa03 23302583 23306921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1709 1 308 Chloroplast and Mitochondria Gene Families AT3G27240 84.516 0.0 504