Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1708 ATGGTAAAGCTTCATACACTGACACTTGATGGCAATTATTTTAATGACACCATCCCCGATTGGTTTGATTCATTGTCTAATCTAAATGTCTTGAGTTTGAAAAGCAACAGGTTGAAGGGTTCATTTCCGTCCTCCTTATGCAGAATTAAGACGCTCAGTGATATTTCCTTGTCTAACAATGAGCTGTCTGGTAAATTGCCTGATTTGAACGCTCTCACTGGCCTACATGTACTGAACTTAAGAGAAAACCGTTTAGATTCTGAATTGCCATTGATGCCCACAGAAGTAGTCACAATTCTGCTAAGCAATAATTCATTTTCCGGCCAGATACCAAGGCAGTTTGGTGAATTGAGTCAGCTTCAGCATCTAGATCTTTCATCAAATCATCTGAGCGGAATACCCCCATCTGCCTTGTTCTCATTGCCAAACATTAGTTACTTAAATTTAGAAAGCAACATGCTAAGTGGGTCACTTCCAGATCAACTAAGTTGTGGCAGCAAACTTGGGTTAGTAGATATTTCTAATAACAAGTTAGTTGGTGGACTTCCTTCTTGCTTGGCCGGTACGCCCGACAGAAGAGTTGTCAAATACGGTGGAAATTGTTTATCTCTTGATTCTCAACTTCAGCAGACAGGGTGTTATTGTGAAGAATCCAGTAGGGGTGGGAAGAAATTCAGGGCATGGAAAATAGCTGTTTTAGGGGCCATCATAATTGGACTTGTTCTTGTTCTTGTGCTTTCGGTGTTTGGAGTTTTCTTTTGCAGAAAATATCAGTCGAGAAAGACATCTGAGCATGATTTGTTGCCAAAGAATTCCAGCAGAGGGGTTTCATCTGAAATCCTCGCAAATGCCCGGTTCATTTCTCAAGCAGTGAAGCTAGGGGCACAAGCTACTCCAGTCTGTCGATTGATTTCAATTGAAGAGTTGAAGGAAGCCACCAGAAACTTTGACTTCTCGACGTTTATTGGTGAAGGCTCCTTAGGGAAGTTAAGGGCCTATTTTAAATCTGCTGCTGCATTTCAGCTGTACAAAGGTAAACTGGAGAATGGATCCTACGTGGTGATACGATCATTGGCTTTGTCAAAGAAATACTCAATTCAAAATCTTAAAGCTCGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGCCTCTTGGGACACTGTATTGATGGCAGTGGACAAGATGACTCTACTCCTAACAAACTTCATCTTGTGTATGAGTATTTGCCAAATGGGAATTATCGTGCCTATCTGTCAGAGTTTTCTCTGGAGAAGCCAATTAAGTGGTCTGATAGATTGGCAATTTTAATAGGAGTTGCCAAGGCAGTACACTTTCTACATACTGGGGTTATTCCTGGTTGTTTTAATAACCAATTGAAGACAAAAAATATTTTGCTTGATGAGCATCATATTCCCAAACTAAGTGACTATGGGATGTCCATCTTAGGAGAAGATCTCGAAAGGATTGAGGCAAACGGACATGGCCCAAAATCATGCCAAAGGAAATCATTTGAAGATGATGTCTATAATTTTGGATTCATACTGCTTGAATCACTTGTTGGACCCATAGCAAGCGAAAGAGGGGAAGAATTTTTTCTAAATGAAAAGGCATCCTTTGGCAGTCAAGATGGTAGAAGGAAAATTGTGGATCCCATTGTTTTGACATCTTCCTCTCAAGAGTCATTATCAATTGCGATAGCTATAACAACCAAATGCATATCTCAACAATCATCGTCTCGCCCCTCATTTGAGGATGTCCTATGGAACTTACAGTATGCAGCTCAAGTACAGGCCACAGCAGATGCAGAGCAGAAATCAGATTCTACACCATAG 1842 0.4066 MVKLHTLTLDGNYFNDTIPDWFDSLSNLNVLSLKSNRLKGSFPSSLCRIKTLSDISLSNNELSGKLPDLNALTGLHVLNLRENRLDSELPLMPTEVVTILLSNNSFSGQIPRQFGELSQLQHLDLSSNHLSGIPPSALFSLPNISYLNLESNMLSGSLPDQLSCGSKLGLVDISNNKLVGGLPSCLAGTPDRRVVKYGGNCLSLDSQLQQTGCYCEESSRGGKKFRAWKIAVLGAIIIGLVLVLVLSVFGVFFCRKYQSRKTSEHDLLPKNSSRGVSSEILANARFISQAVKLGAQATPVCRLISIEELKEATRNFDFSTFIGEGSLGKLRAYFKSAAAFQLYKGKLENGSYVVIRSLALSKKYSIQNLKARLDLLSKLHHPNLVSLLGHCIDGSGQDDSTPNKLHLVYEYLPNGNYRAYLSEFSLEKPIKWSDRLAILIGVAKAVHFLHTGVIPGCFNNQLKTKNILLDEHHIPKLSDYGMSILGEDLERIEANGHGPKSCQRKSFEDDVYNFGFILLESLVGPIASERGEEFFLNEKASFGSQDGRRKIVDPIVLTSSSQESLSIAIAITTKCISQQSSSRPSFEDVLWNLQYAAQVQATADAEQKSDSTP 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1708 613 Gene3D Phosphorylase Kinase; domain 1 289 411 - -
Bisa03g1708 613 Gene3D Ribonuclease Inhibitor 1 92 IPR032675 -
Bisa03g1708 613 Gene3D Ribonuclease Inhibitor 93 219 IPR032675 -
Bisa03g1708 613 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 230 602 - -
Bisa03g1708 613 ProSiteProfiles Leucine-rich repeat profile. 119 140 IPR001611 GO:0005515
Bisa03g1708 613 Gene3D Transferase(Phosphotransferase) domain 1 412 612 - -
Bisa03g1708 613 Pfam Leucine rich repeat 3 62 IPR001611 GO:0005515
Bisa03g1708 613 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Bisa03g1708 613 Pfam Protein tyrosine and serine/threonine kinase 321 590 IPR001245 GO:0004672|GO:0006468
Bisa03g1708 613 SUPERFAMILY L domain-like 3 205 - -
Bisa03g1708 613 SUPERFAMILY Protein kinase-like (PK-like) 299 593 IPR011009 -
Bisa03g1708 613 SMART LRR_typ_2 117 140 IPR003591 -
Bisa03g1708 613 SMART LRR_typ_2 72 95 IPR003591 -
Bisa03g1708 613 SMART LRR_typ_2 141 165 IPR003591 -
Bisa03g1708 613 SMART LRR_typ_2 25 49 IPR003591 -
Bisa03g1708 613 SMART LRR_typ_2 1 24 IPR003591 -
Bisa03g1708 613 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 412 612 - -
Bisa03g1708 613 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 96 220 - -
Bisa03g1708 613 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 279 411 - -
Bisa03g1708 613 ProSiteProfiles Protein kinase domain profile. 316 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1708 Bisa-ChrBisa03 23280103 23283417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1708 1 541 Miscellaneous Gene Families AT5G14210 56.703 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Bisa03g1708 PK_Tyr_Ser-Thr 1.1e-17 CL0016