Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1704 ATGGGCATAATAGCAGAAATGATCACTGAGCTCCATTATCTGAGACTTTTGGGCTTTTTGTTCTGCCTCTCTGTCTTCTCACTTGGGGAAGATTTGATCAGCTGCGACACAAAATCCCCACAAGCCTCTGGCTATTCTTGCAGCAGAAATGAATCACAATGTGGAACATTTGCAGTTCTTGTGTCTAATTCATACTACTCATCTCTCTTCAACTTGAGCTTTTACTTGGGAATCAATCGCTTTGTGATTGCAGAAGCAAATGGGTTCTCTGCAGAAACAGAGTTTCTCTCCCAGGAACAGCCTCTGCTGATACCAATAAACTGCAAATGCAGAAATGGCTTCTTTGGCGCTGAGTTAACCAAAACCACAATTAAAGGTGAGAGCTTTTATGGTATTGCTCAGTCTCTAGAGGGCTTGACGACCTGCAAGGCTATTAAGGATACAAACCCTGATTTGAAACCTTGGGATCTCGATGATAACATCAGATTGCTGATCCCACTAAGATGTGCCTGCCCCTTCTCCTCCACACATAGTCCAAGGCCGAAGCATCTGATTTCTTACCCAGTAAGTGAAGGTGATACAGTTTTCAATTTGGCATCAAAGTTCAATACTTCTCCAGGAGGAATAATCTCCGCAAATAACATATCCTCAGAAGACTCTAAGCTCACGCCCTTTACCTCACTTCTCATACCACTCAATGGGGAGCCTATTCTTGGTTCTCTGGCAAAACCCAGTGAACCCAAATCGAGTAATTCATCAACTAACATCCCAGTGATTAATCCACCACACAAGAAGCCTAAAATGTGGAAGGCTGAATTGTACATTGGGCTAGCTGGGGTTGCCGTCGGACTCTGTCTTGCTTCTTTAGCAGCTTTCATTGTGATCAGATTGAAGAATGAGAGGACAGATACAAAAAGAGGCGATTTGGAGCTACAACATCTTAATCTCAGCGTGAGAACCACCAGCGACAAGAAAGTGTCCTTCGAGGGATCCCAGGACGGGAAAATCATCTGTAATACTCCTCGTACGATGATGCTGGAGACATACACTGTCGAGGAGCTGAGAAAAGCGACAGAAGATTTCAGCTCGAGCAATCACATAGAGGGCCCAGTCTTCCATGGCCGTCTAGAAGGAAAGAACATGGCAATCAAACGAACAGAAACAAAGACTGTGTCAAAATTAGATCTTGGGCTCTTCCATAGCACAATCCACCACCACCCCAACATTCTTAAAATCCTCGGAACGTGTTTGACACAAGGCCCCGAATCATTTCTCGTTTTCGAATACGCAAAAAACGGGTCTTTGAAAGACTGGCTTCACGGTGGGTTGGCCATAAAGAACCAGTTCATATCTTCCTGCTATTGCTTCCTCACATGGAGCCAGAGGATCAGAATCTGCCTCGACGTGGCCATGGCCTTGCAGTATATGCACCACGTTATGAACCCAAGCTACGTCCATAGAAACGTCAAGAGCAGGAACATATTTTTAGACGAAGAATTCGGAGCCAAGTTAGGAAATTTCGGAATGGCAGATTGTGTAGAGAACGATACAGAGGATCCAAAATTCTACTCAACAAACCCTTCTTCTTGGAGTATGGGCTATTTAGCACCAGAATATGTACACCAAGGTATAATATCTCCAAGCATTGATATTTTCGCTTATGGGGTGGTTCTACTGGAAGTTCTGTCAGGTCAGACACCAATAAGCAGGCCAAATGAGAAGGGGGGAGAAGGAAGCGTTTGGCTTACAGATAAAATAAGGTGGATTTTGAAGTCAGAGAATGAAGATGAATTAAGAGGGTGGATGGACAGTGCGTTGGGTGAGAATTATTCGTTTGATGCAGCAGTGAGAGTAGCCAAAATTGCAAGAGATTGCGTGGAGGAAGATTGTGGTATGAGGCCAAGTGCAGGGGAAGTTGTGGAGAAGCTATCGAGGTTGGTGGAGGAACTTCCAGAAGAAGATCACATGTTGATGTGTGAAAGCTCTTGCAAGCCTCTGGTGAAGGCCGTCGCTAACCGATGA 2022 0.4476 MGIIAEMITELHYLRLLGFLFCLSVFSLGEDLISCDTKSPQASGYSCSRNESQCGTFAVLVSNSYYSSLFNLSFYLGINRFVIAEANGFSAETEFLSQEQPLLIPINCKCRNGFFGAELTKTTIKGESFYGIAQSLEGLTTCKAIKDTNPDLKPWDLDDNIRLLIPLRCACPFSSTHSPRPKHLISYPVSEGDTVFNLASKFNTSPGGIISANNISSEDSKLTPFTSLLIPLNGEPILGSLAKPSEPKSSNSSTNIPVINPPHKKPKMWKAELYIGLAGVAVGLCLASLAAFIVIRLKNERTDTKRGDLELQHLNLSVRTTSDKKVSFEGSQDGKIICNTPRTMMLETYTVEELRKATEDFSSSNHIEGPVFHGRLEGKNMAIKRTETKTVSKLDLGLFHSTIHHHPNILKILGTCLTQGPESFLVFEYAKNGSLKDWLHGGLAIKNQFISSCYCFLTWSQRIRICLDVAMALQYMHHVMNPSYVHRNVKSRNIFLDEEFGAKLGNFGMADCVENDTEDPKFYSTNPSSWSMGYLAPEYVHQGIISPSIDIFAYGVVLLEVLSGQTPISRPNEKGGEGSVWLTDKIRWILKSENEDELRGWMDSALGENYSFDAAVRVAKIARDCVEEDCGMRPSAGEVVEKLSRLVEELPEEDHMLMCESSCKPLVKAVANR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1704 673 MobiDBLite consensus disorder prediction 244 259 - -
Bisa03g1704 673 Pfam Protein tyrosine and serine/threonine kinase 402 642 IPR001245 GO:0004672|GO:0006468
Bisa03g1704 673 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 30 650 - -
Bisa03g1704 673 SMART LysM_2 186 231 IPR018392 -
Bisa03g1704 673 SUPERFAMILY LysM domain 185 231 IPR036779 -
Bisa03g1704 673 Gene3D LysM domain 172 236 IPR036779 -
Bisa03g1704 673 Pfam LysM domain 187 231 IPR018392 -
Bisa03g1704 673 FunFam PTI1-like tyrosine-protein kinase 3 430 657 - -
Bisa03g1704 673 CDD LysM 185 230 IPR018392 -
Bisa03g1704 673 Gene3D Phosphorylase Kinase; domain 1 336 429 - -
Bisa03g1704 673 ProSiteProfiles LysM domain profile. 185 230 IPR018392 -
Bisa03g1704 673 ProSiteProfiles Protein kinase domain profile. 300 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa03g1704 673 SUPERFAMILY Protein kinase-like (PK-like) 339 643 IPR011009 -
Bisa03g1704 673 Gene3D Transferase(Phosphotransferase) domain 1 430 663 - -
Bisa03g1704 673 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1704 Bisa-ChrBisa03 23238926 23240947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1704 44 668 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 41.337 1.72e-157 467
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa03g1704 PK_Tyr_Ser-Thr 8.4e-29 CL0016