Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1697 ATGCGAGAGGATTCCAGGCAGCTTGAAGACTCAGCCATGAATTGCTGCAACTCCATGGAAGAGGAAGTTGAAGGAGAAGAAAGAGAGCCAGAAAGCATTTCACTGAATCAGCCTCTGCTCAAGAGGACTCGAACTGTGTCTTCTACACCACTTGCACTTGTAGGAGAAAAGGTTTCTTATATAGAAAGTTTGGACTACGAGATAAACGAGAATGATGTATTCAAGCATGACTGGAGGAGCAGATCCAGAGTTCAAGTATTGCAGTATATATTCTTGAAATGGTCAGTGTCATTCCTTGTTGGACTTCTTACTGGCATCATAGCAACTCTCATTAATCTTGCTATAGAGAACATTGCGGGCTACAAGCTTCTCGCAGTTGTTGAATATATCCACAAAGAAAGGTACTTTGCGGGGTTCTTGTATTTTAGTGGCTTTAATTTTCTGTTAACTTCGGTGGCTGCTGTTTTGTGTGTGTGTTTTGCGCCCACAGCGGCAGGACCTGGAATACCTGAAATCAAAGCTTATCTGAATGGGGTTGGCACTCCCAACATGTATGGTGCTACAACAATGATTGTCAAGATAATTGGAAGCATTGGAGCAGTCTCCGCAGGCCTAGACTTAGGAAAAGAAGGGCCGCTGGTACATATCGGCAGCTGCATTGCTTCCTTACTAGGGCAAGGGGGCCCTGACAATTACCAGATCAAATGGCGCTGGCTTCGATATTTCAACAACGATCGCGACCGTCGCGACCTTATTACCTGTGGTGCTTCTTCAGGGGTTTGTGCAGCTTTCAGGGCCCCTGTAGGTGGAGTTCTGTTTGCTCTGGAAGAGGTGGCAACGTGGTGGAGAAGTTCTCTCCTCTGGAGAACTTTTTTCAGCACAGCTGTGGTGGTGGTGGTGCTCAGGGCCATCATTGAAATCTGCAACTCTGCGAAATGTGGACATTTTGGGAAAGGAGGATTGATCATATTTGATGTAAGCAATGTTACTGTGAGGTACCACGTGATGGATATCATCCCTGTTACAGTTATTGGAATCATTGGGGGGGTACTAGGAAGCCTCTATAATTATCTTCTCCACAAGGGAAGATTACATAAGATCCTCCTCAGTCTTGCAGTTGCACTCTTCACCTCAGTTTGCCAATATGGTCTTCCATTCCTAGCTCAATGCACCCCCTGTAATTCATCACTTCCAGAGTCTGTCTGTCCCACCAATGGACGATCTGGAAATTTCAAACAATTTAATTGCCCAAAGGGCTACTACAATGATCTTGCTACGCTGCTCCTTACTACTAATGATGATGCTGTTCGAAACATATTCTCAAGCAACACACCTCAGGAATATCATCCATCCTCTCTCCTAATTTTCTTTGCACTTTATTGCATATTAGGACTAATTACTTTCGGCATTGCTGTGCCCTCTGGACTCTTTCTCCCAATCATCCTCATAGGTTCAGGATATGGCCGTCTTTTGTGCATCTTTATGGGACCACATACAAAAATTGACCAAGGGCTGTTTGCCGTTCTTGGTGCAGCCTCCCTCATGGCTGGTTCAATGAGGATGACTGTATCCCTATGTGTTATCTTCCTTGAACTCACCAACAATCTTCTCCTATTACCAATAACAATGATTGTTCTCCTAATAGCCAAAACTGTTGGAGACTATTTCAACCCAAGCATCTATGAGATTATACTGCACTTAAAAGGCCTTCCTTTCTTGGATGCAAATACTGAGCCATGGATGAGAAATCTCACAGTAGGTGAGCTTGTTGACGTCAAACCAGCAGTGGTTACTCTCCATGGAATAGAAAAGGTAGTCCGCATAGTAGATGTCTTGAAAAGCACTACAAATAATGGTTTCCCTGTTGTGGATGATGGATTGGTATTACCAACAGGACTGGCCAATGGGGCAACAGAAGTGCATGGCTTGATCCTAAGAGTACACCTCATTCAGGCACTTAAAAAAAAGTGGTTCTTAAAAGAGAAAAGGAGAACAGAGGAATGGGAAGTTAGAGAAAAATTTACCTGGGTAGAACTAGCTGAGAGAGAAGGGACTATTGAAGAGGTGGCTGTGACAAAGGAGGAAATGGAGATGTTTGTTGATTTACATCCTCTAACCAATACAACTCCCTATACAGTGTTAGAAAGCATGTCAGTGGCAAAAGCAGTGATACTCTTCAGGCAAGTAGGACTCCGCCATCTGCTTGTGCTACCCAAGTATCAAGCATCAGGGGTATCTCCTGTAATTGGGATCTTGACCAGACAGGATCTACTGGTCCACAACATTTTGACAGTCTTTCCTCACCTGGGAAAATCCAATGGCGGAGAAAATAGGAAAGGGAGGTCCCCTAATCACTGA 2358 0.4427 MREDSRQLEDSAMNCCNSMEEEVEGEEREPESISLNQPLLKRTRTVSSTPLALVGEKVSYIESLDYEINENDVFKHDWRSRSRVQVLQYIFLKWSVSFLVGLLTGIIATLINLAIENIAGYKLLAVVEYIHKERYFAGFLYFSGFNFLLTSVAAVLCVCFAPTAAGPGIPEIKAYLNGVGTPNMYGATTMIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYQIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSSLLWRTFFSTAVVVVVLRAIIEICNSAKCGHFGKGGLIIFDVSNVTVRYHVMDIIPVTVIGIIGGVLGSLYNYLLHKGRLHKILLSLAVALFTSVCQYGLPFLAQCTPCNSSLPESVCPTNGRSGNFKQFNCPKGYYNDLATLLLTTNDDAVRNIFSSNTPQEYHPSSLLIFFALYCILGLITFGIAVPSGLFLPIILIGSGYGRLLCIFMGPHTKIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDYFNPSIYEIILHLKGLPFLDANTEPWMRNLTVGELVDVKPAVVTLHGIEKVVRIVDVLKSTTNNGFPVVDDGLVLPTGLANGATEVHGLILRVHLIQALKKKWFLKEKRRTEEWEVREKFTWVELAEREGTIEEVAVTKEEMEMFVDLHPLTNTTPYTVLESMSVAKAVILFRQVGLRHLLVLPKYQASGVSPVIGILTRQDLLVHNILTVFPHLGKSNGGENRKGRSPNH 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1697 785 Gene3D Clc chloride channel 84 575 - -
Bisa03g1697 785 CDD CBS_pair_voltage-gated_CLC_euk_bac 593 760 - -
Bisa03g1697 785 SUPERFAMILY CBS-domain pair 578 758 IPR046342 -
Bisa03g1697 785 ProSiteProfiles CBS domain profile. 706 772 IPR000644 -
Bisa03g1697 785 PRINTS Chloride channel signature 504 520 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 PRINTS Chloride channel signature 522 541 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 PRINTS Chloride channel signature 472 492 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 PRINTS Chloride channel signature 193 212 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 PRINTS Chloride channel signature 560 574 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 PRINTS Chloride channel signature 257 276 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 PRINTS Chloride channel signature 162 179 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bisa03g1697 785 FunFam Chloride channel ClC3 85 391 - -
Bisa03g1697 785 CDD ClC_6_like 62 573 - -
Bisa03g1697 785 Gene3D - 576 764 IPR046342 -
Bisa03g1697 785 PRINTS Plant CLC chloride channel signature 67 75 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa03g1697 785 PRINTS Plant CLC chloride channel signature 278 286 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa03g1697 785 PRINTS Plant CLC chloride channel signature 310 317 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa03g1697 785 PRINTS Plant CLC chloride channel signature 424 440 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa03g1697 785 PRINTS Plant CLC chloride channel signature 292 302 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bisa03g1697 785 SMART cbs_1 595 654 IPR000644 -
Bisa03g1697 785 SMART cbs_1 709 762 IPR000644 -
Bisa03g1697 785 SUPERFAMILY Clc chloride channel 71 575 IPR014743 -
Bisa03g1697 785 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 41 763 - -
Bisa03g1697 785 Pfam Voltage gated chloride channel 152 553 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1697 Bisa-ChrBisa03 23156388 23160841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1697 24 778 Ion Channels AT3G27170 76.893 0.0 1194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1697 03 23156388 23160841 Bisa03g1697 03 23156388 23160841 ECH