Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1692 ATGGCGGGAGAGGAGGAGCCCAAGCAAAGCACATCACCATGCCCGTCTTCTACTGCTACTACTTCTTCCTTTCCTCTTGTAGTAAAAATGGATGATCCGAACAAAAAATGTTGGAGAAAGCAAGTGGACGAAAAACTCAAGAGGCTTCACTCTCTTCTCTTCGGCGCCGACCTTGCCCTTGAGAAGCAGGACTTCGAGTCGGCTTACATCCTCGGGCTTCGTCTCATCGGCTTCCTCGACTCCCACTGTCACTCTGATGTCGACGAAGCTTATATACGTCCCATTCGCCGTGAAGCCTTGGCGAAAATCGATACGGCTCGTCGATCCCTCATTCCGGACTCTGATTGCAAAGCTTTCGAACAAGCAAAGAAGTCTCCAGGGTGCATTTTTGGCAAAACAGGAGATATAGACATTGAGAAAATTAAGAAGTCGAAGTACTTTCACGCTCTTCTCAAAGAAAAGGTTGATCATCTGGGGAAGCAAGAGAAAGCAGGTAGCAAAGCGTCAAAAGAATTAGTGCAAGCAAAGTTGACATCTATGTACGGGAAAAGTACATTGAGGAATAGAAATGATTCCAAATCGAATTTGAAACATAACAGCTCTGAGGACTGCATGATTATTGGACAGCCTCAGTCACATGTCAACCAAACAAAGGATCATATTGTCTCTTCTTTCTTGAAAGCTGAAGGGGAAGAAAGAATTTCGGCAAACACTTTGGGAACAAAACGTGTACATGTGGAGAGTAACAGTATTAGCCCTCAAGTCGGTCATGCAAAGTCACCTTCAAGCAACAAGAAAGTTGACCCTGATAATTGTGGCAGTTTTGTTACTGCCAGAGCGAAATTGGAAATGGAAGCAACGAAGAGACAAGAAGCAGGCTGTTCACCCAGTGCATCTGTCTCACAATGTGAGAACAATTCTGTGAATCGGTTATATGGTGGGAGATCATATGGTGTTTCACGACGTGGCTTCCGGGGTAATTTTGTTCCCCCTATGAAATCCACTGGAACTGGTGTTGCAAATATGACTTCACGAACTTCTGGAAAGAATGATGATGCTTTAGATGATTCGACAAAGAGATGTTTGGAAATGCTATGTGGCCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGTCTTATTGAACATGTTAGCAACGAGATTATGGATAGAGATCCCAATGTCCGGTGGGATGACATTGCGGGATTGGAGCATGCCAAGAAATGTGTCACTGAGATGGTCATATGGCCTCTGCTACGTCCTGACATATTTAAGGGATGTCGCTCTCCTGGTAGAGGTCTGCTTCTATTTGGTCCACCAGGAACTGGTAAAACAATGATTGGAAAAGCTATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATATCTGCAAGCTCGTTGACAAGCAAGTGGATTGGTGAAGGTGAAAAACTAGTAAGAGCGCTTTTTGGAGTTGCTAGTTGTCGCCAGCCAGCTGTAATATTTGTTGATGAAATAGATTCGCTTCTGTCCCAGCGTAAGTCAGAGGGTGAGCATGAATCCAGTAGAAGACTAAAGACACAGTTTCTCATTGAAATGGAAGGCTTTGACAGTGGTAACGATCAGATTCTTCTTATAGGGAATAACACGAACATAAATGATAGAACTTGTGGAAAAAGAAAACTGAATGGATTTCAATTAAAACAGAAACTAGAGATTACAATCTCCTGCCAGAGTCGGAGACTCGGTACTGGATCAAGGGTCAAGGGAAGGGGAGAGGGATGTCTAACTGGGCCTATACCTGAGGCCCAATGGTTGGCTAGTTTACTCCAGGAGAAAGAAGCAAGAGAAGAGAAGTTAGTTATGGAGAGAGAGAGAGAGTTAGGGAAGCGAGGAGTATTTGAGAGGGATGGGGGAATCATAGAGGGATTGGATTATACTTATACAGGAGCAACAAATCGCCCCCAAGAGCTTGATGAAGCAGCACGAAGACGACTTACCAAAAGACTTTATATCCCCCTGCCATCCCCAGAGGCAAGAGCTTGGATTGTTCGCAGCCTGTTGGAGAAGGACGGACTATTCAAGCTCTCAAAGGAGGAAACTGATACCATATGCAACTTAACGGAAGGGTATTCGGGATCAGACATGAAAAATTTGGTGAAGGATGCTTCCATGGGTCCCCTTAGAGAGGCTTTAAGACAAGGCATAGAAATTACTAATTTGAAAAAGGAGGATATGCGGCCAGTAACTCTTGAGGACTTTGAGAATGCCCTACATGAGGTGAGGCCTTCTGTTTCTCTAAATGAACTTGGCACTTACGATGAATGGAACAAGCAGTTTGGAAGCCTATCACTGTAG 2346 0.445 MAGEEEPKQSTSPCPSSTATTSSFPLVVKMDDPNKKCWRKQVDEKLKRLHSLLFGADLALEKQDFESAYILGLRLIGFLDSHCHSDVDEAYIRPIRREALAKIDTARRSLIPDSDCKAFEQAKKSPGCIFGKTGDIDIEKIKKSKYFHALLKEKVDHLGKQEKAGSKASKELVQAKLTSMYGKSTLRNRNDSKSNLKHNSSEDCMIIGQPQSHVNQTKDHIVSSFLKAEGEERISANTLGTKRVHVESNSISPQVGHAKSPSSNKKVDPDNCGSFVTARAKLEMEATKRQEAGCSPSASVSQCENNSVNRLYGGRSYGVSRRGFRGNFVPPMKSTGTGVANMTSRTSGKNDDALDDSTKRCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRRLKTQFLIEMEGFDSGNDQILLIGNNTNINDRTCGKRKLNGFQLKQKLEITISCQSRRLGTGSRVKGRGEGCLTGPIPEAQWLASLLQEKEAREEKLVMERERELGKRGVFERDGGIIEGLDYTYTGATNRPQELDEAARRRLTKRLYIPLPSPEARAWIVRSLLEKDGLFKLSKEETDTICNLTEGYSGSDMKNLVKDASMGPLREALRQGIEITNLKKEDMRPVTLEDFENALHEVRPSVSLNELGTYDEWNKQFGSLSL 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1692 781 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 441 460 - -
Bisa03g1692 781 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 634 650 - -
Bisa03g1692 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 396 776 IPR027417 -
Bisa03g1692 781 MobiDBLite consensus disorder prediction 249 272 - -
Bisa03g1692 781 MobiDBLite consensus disorder prediction 1 20 - -
Bisa03g1692 781 Gene3D - 646 769 IPR027417 -
Bisa03g1692 781 Gene3D - 378 576 IPR027417 -
Bisa03g1692 781 MobiDBLite consensus disorder prediction 249 270 - -
Bisa03g1692 781 MobiDBLite consensus disorder prediction 328 354 - -
Bisa03g1692 781 Pfam ATPase family associated with various cellular activities (AAA) 437 546 IPR003959 GO:0005524|GO:0016887
Bisa03g1692 781 PANTHER AAA DOMAIN-CONTAINING 200 544 - -
Bisa03g1692 781 Coils Coil 602 622 - -
Bisa03g1692 781 Pfam Vps4 C terminal oligomerisation domain 743 777 IPR015415 -
Bisa03g1692 781 Gene3D - 671 755 - -
Bisa03g1692 781 MobiDBLite consensus disorder prediction 334 348 - -
Bisa03g1692 781 SMART AAA_5 433 672 IPR003593 GO:0016887
Bisa03g1692 781 FunFam Katanin p60 ATPase-containing subunit A-like 2 395 511 - -
Bisa03g1692 781 FunFam Fidgetin like 1 671 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1692 Bisa-ChrBisa03 23089524 23095807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1692 433 545 Calmodulin-binding Proteins AT3G56690 34.513 2.04e-16 82.0