Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1669 ATGGAAGTGGTGTCTTTCGAAAGAAATGGCTTGAAAGCGAAACAAATAATTGAGTTCTTTGAAGAGGAATGCATATTGAAAACTGGAATTGCGCGACGAAGCGAAGTTGGAGGAGAAGTGGGAATAGGTGAAGTCACCCAAAGACGGAATCCTGAGCAGACTCGTATAGATTTGGTATTCAACAAGTTGGTGAAGGAGTTAGGGGATCCTGTTGACTTTGAACTTCCAGATTGGTTTAATAAGTGGAAGCCAATGCAATACACATTTATAAAGCGTAGTATCCTTTATATATATCTCACAAAGAAGGTTAAGAGAAGGCTTGATGATGATGGCATATTCTGTTCATGTACACCTTCACCTGGATCTCCGAGTGTATGTGGTAAAGATTGCCACTGTGGGATGCTTCTGTCTAGCTGCTCTTCAGGCTGCAAATGTGGTAGTTCCTGTCTCAATAAACCGTTTCAGCATCGACCTGTGAAAAAGATGAAATTGGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGGGAGTTTGTCATAGAATATGTCGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACACCGGGGGGAGACGAACTTCTACTTATGTGAAATTAATCGAGATATGGTGATTGATGCAACATATAAGGGAAACAAATCAAGATATATAAATCATAGTTGCTGCCCCAATACGGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCCACTCGAGACATAAGGAAGGGCGAGCATCTGACTTATGATTATCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTCGAGTGCAGGCGTAAGCTTGGGGTCCGACCTACCAAGCCTAAAATGTCTTCAGATGCTGCGCTAAAATTAGTCGCATATCAGGTGGCTGCGTCTTCTCCAGAGTTGAAAGCAATTCTATCTAGAAAAGAAATATGTCTATATGGCTGTTAA 1026 0.4123 MEVVSFERNGLKAKQIIEFFEEECILKTGIARRSEVGGEVGIGEVTQRRNPEQTRIDLVFNKLVKELGDPVDFELPDWFNKWKPMQYTFIKRSILYIYLTKKVKRRLDDDGIFCSCTPSPGSPSVCGKDCHCGMLLSSCSSGCKCGSSCLNKPFQHRPVKKMKLVQTEKCGSGIVADEDIKQGEFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGAVECRRKLGVRPTKPKMSSDAALKLVAYQVAASSPELKAILSRKEICLYGC 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1669 341 ProSiteProfiles SET domain profile. 160 277 IPR001214 GO:0005515
Bisa03g1669 341 SMART shorttest3 109 159 IPR006560 GO:0005634|GO:0042054
Bisa03g1669 341 SMART set_7 160 283 IPR001214 GO:0005515
Bisa03g1669 341 PANTHER SET DOMAIN PROTEINS 72 306 - -
Bisa03g1669 341 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 124 334 IPR025787 -
Bisa03g1669 341 CDD SET_ASHR3-like 161 299 - -
Bisa03g1669 341 SMART PostSET_3 283 299 IPR003616 -
Bisa03g1669 341 FunFam Histone-lysine N-methyltransferase 73 315 - -
Bisa03g1669 341 ProSiteProfiles AWS domain profile. 109 158 IPR006560 GO:0005634|GO:0042054
Bisa03g1669 341 Gene3D SET domain 77 315 IPR046341 -
Bisa03g1669 341 ProSiteProfiles Post-SET domain profile. 283 299 IPR003616 -
Bisa03g1669 341 Pfam SET domain 171 276 IPR001214 GO:0005515
Bisa03g1669 341 SUPERFAMILY SET domain 80 295 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1669 Bisa-ChrBisa03 22760594 22764161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1669 77 295 C2H2 Transcription Factor Family AT2G23740 30.545 2.60e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa03g1669 SET 3.4e-20 No_clan