Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1664 ATGGAGTGTCGGAACATTGATGTTGATCTCAAGAGGCAAACCTATGTTCCTTCAGGGGTGGAGGAAGTACAAGGGTCAGAGAGAAAGAAGATAGTAATAAGGTACAAGGAGTGCCAGAAGAACCATGCAGCTGCCATAGGAGGGAATGCAAGAGATGGGTGTGGTGAGTTCATGCCTTCTGGAGAAGAAGGCTCCCCCGAATCCCTCACCTGCTCTGCCTGCAACTGCCACAGAAACTTCCACAGAAAACACCTCGAGCCCCAAGACTCTGCAGATACCTATATTTATCAGTTCATAAAACCAGTCTCCTGCAGGCATATTAGTGAGGACGATGAAAAAGAGGAGAGGGTGATGAGGAAGAGGGTGAGGACCAAATTCAGTGAAGAGCAGAAGGAGAAGATGGTGAGGTTCGCAGAGAAGGTGGGGTGGAGGATTCAGAAGGTGGAGGAGGCAGTGGTGCAGCAGTTTTGCCAGGAGGTGGGAATCAAGAGAAGAGTCCTCAAAGTGTGGATGCACAATAACAAGAACACTTTCGCTAAGAAACTTAACTCTTCTCCAATCTCCACTTCCTAG 573 0.4852 MECRNIDVDLKRQTYVPSGVEEVQGSERKKIVIRYKECQKNHAAAIGGNARDGCGEFMPSGEEGSPESLTCSACNCHRNFHRKHLEPQDSADTYIYQFIKPVSCRHISEDDEKEERVMRKRVRTKFSEEQKEKMVRFAEKVGWRIQKVEEAVVQQFCQEVGIKRRVLKVWMHNNKNTFAKKLNSSPISTS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1664 190 Gene3D - 105 180 - -
Bisa03g1664 190 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 25 177 - -
Bisa03g1664 190 FunFam Zinc-finger homeodomain protein 2 106 180 - -
Bisa03g1664 190 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 35 84 IPR006456 -
Bisa03g1664 190 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 34 84 IPR006456 -
Bisa03g1664 190 SUPERFAMILY Homeodomain-like 116 180 IPR009057 -
Bisa03g1664 190 NCBIfam homeobox domain, ZF-HD class 119 176 IPR006455 -
Bisa03g1664 190 Pfam ZF-HD protein dimerisation region 33 84 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1664 Bisa-ChrBisa03 22705045 22705617 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1664 29 183 ZF-HD Transcription Factor Family AT1G14440 50.251 3.76e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bisa03g1664 ZF-HD_dimer 2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g1664 03 22705045 22705617 Bisa03g1664 03 22705045 22705617 ECH