Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1653 ATGGATCGGAAGTCGGCAACCTCTTTTCCTGCTCGTGCTCGCGCCTCTCCCTTCATTTGCTGCTTCACAGCTCCGGTGACCTCTCCTCCGACTCCGTTGGCCTGTCTGCCGTGCTCCGGTGACTTGCTCCAGAAGATTTCTATCGTTCCAAACATGGCTGCCAGACTTATGTTTGAGAATTCTTGTGAAGTTGGAGTGTTTTCAAAACTTACCAATGCCTATTGTTTAGTAGCCATCGGAGGTTCTGAAAACTTCTACAGTTCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTGGTGAAAACCTCCATTGGTGGCACTCGTATTGTTGGCCGCCTTTGTGCTGGAAACAAGAATGGGCTTCTCTTACCTCACACTACCACAGACCAAGAACTTCAACATTTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGCATAGAAGAAAGATTATCTGCTCTAGGAAATTGTATAGCATGTAATGACCACGTGGCCCTGACGCACACTGATCTTGACAGGGAAACTGAGGAGATGATTGCAGATGTTCTTGGAGTAGAAGTTTTTAGGCAGACTGTTGCCGGTAATATTCTCGTTGGAAGTTACTGTGTTTTCTCCAACAGAGGTGGTTTGGTCCACCCACACACTTCCATTGAAGACTTGGATGAACTTTCTACGCTTCTTCAGGTTCCTCTGGTGGCCGGAACTGTGAATCGTGGTAGTGAGGTTATTGCTGCTGGCATCACAGTTAATGACTGGACAGCCTTTTGTGGTTCAGACACCACAGCAACAGAACTCTCTGTGGTTGAGAGTGTCTTCAAGCTCAGGGAAGCCCAACCTAGTGCCATTGTGGACGAAATGAGGAAATCGCTTATTGATAGCTACGTCTAA 891 0.4691 MDRKSATSFPARARASPFICCFTAPVTSPPTPLACLPCSGDLLQKISIVPNMAARLMFENSCEVGVFSKLTNAYCLVAIGGSENFYSSFEAELADVIPVVKTSIGGTRIVGRLCAGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALTHTDLDRETEEMIADVLGVEVFRQTVAGNILVGSYCVFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGITVNDWTAFCGSDTTATELSVVESVFKLREAQPSAIVDEMRKSLIDSYV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1653 296 CDD IF6 53 274 IPR002769 GO:0042256|GO:0043022
Bisa03g1653 296 Pfam eIF-6 family 55 254 IPR002769 GO:0042256|GO:0043022
Bisa03g1653 296 NCBIfam translation initiation factor IF-6 55 275 IPR002769 GO:0042256|GO:0043022
Bisa03g1653 296 FunFam Eukaryotic translation initiation factor 6 52 276 - -
Bisa03g1653 296 SMART eIF6neu2 54 255 IPR002769 GO:0042256|GO:0043022
Bisa03g1653 296 Hamap Translation initiation factor 6 [eif6]. 41 296 IPR002769 GO:0042256|GO:0043022
Bisa03g1653 296 Gene3D - 52 276 - -
Bisa03g1653 296 SUPERFAMILY Pentein 52 275 - -
Bisa03g1653 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 52 295 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1653 Bisa-ChrBisa03 22492170 22496590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1653 52 296 Eukaryotic Initiation Factors Gene Family AT3G55620 88.980 2.67e-169 467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0569 01 8634254 8637564 Bisa03g1653 03 22492170 22496590 CCT