Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1614 ATGTTGATGTACAGGAGACTTTTATGCGTTTTGGAGTATTCATTCGACATGTTAACTTTGACCTCGAGGTTTATTATATATATGGAGGAGGGAGATGAAGGTGAACATCAATTAAGGAGTTGGGTTAAGCAGAGATTAGGGATGGAGAAAAACATGTTGGTAGGATTGGTTTGGATGTTGATATTGTGCAGTGTTGAAGGCAGAGGCAGTGTGATCACTGAACTGCCAGGGTTTGAGGGAAGACTGCCATCGAAGCAGTATGGGGGATATATAACCATAGACGGAGACAAGAATCTGTACTATTACTTCGTCACCTCTCAGACTAATCCTCATTCTGATCCTCTTGTTCTGTGGCTCAATGGCGGACCTGGCTGCTCCAGCTTCGATGGCTTCGTTTATGAGCACGGACCCTTCAACTTTGAGGCACCTAAAACCAATGGAAGCCTTCCCACTTTGCATCTTAATCCCTACTCTTGGTCCAAGGTTTCAAACATAATTTATTTGGATTCGCCGGTGGGGGTTGGGCTCTCATACTCCACCAACTCATCCAAATACGATACTGGAGACCTCCAAACTGCCTCCGATACTCATGCTTTCCTCTTAAAATGGTTCGAGCAATTCCCAGAATTCCTGGCAAATCCGTTCTATGTTTCTGGAGAGTCGTATGCCGGAGTGTATGTCCCCACTCTTGCTTATCAAATAGTTCAAGGACTCAAGAGTGGCACAAAGCCCGTCATTAATTTTAAGGGTTACATGATAGGAAATGGTGTGACGGATGAAATATTTGATGGCAATGCTCTCATTCCATTCGTGCACGGCATGGGTCTCATTTCCGACAACATCTATGAGGACGTTGAAACTGCTTGCAAGGGAAATTACTACAATCCTGATGATGCTTTTGAAGATAAAGCATGCTCCAAGAACCTTAATAAAGTATACAGGGCTGTTGATGTACTTAACGTGTACAACATTCTGGAGCCATGCTATCATGAGCCTTCAAATTCTGGAAACACAAGCCTTCCAATTCCACAGAGTTTCCAGCAATTAGGGTTTAAGGATACAGAGAAGCCACTGCGCGTTAGGAAGAGGATTTTTGGTCGAGCTTGGCCTTTACGAGCACCCGCCAAAAACGGCGTCGTTTCATTGTGGCCTCAAATATTGGCTCAAAACAAAATGAACGTCATGTGTGTTAACGATGAAGTCGCAAGTTCATGGCTAAACAATGAAGCAGTCAGGAAGGCCATTCATGCGGAGCAAGAAGGTGTGGCGGGTGCATGGGAACTATGCACTGAAAGGATATCTTACACGCAAGATGCAGGAAGCATGATTCCTTACCACAAGAACCTAACCATGCAGGGCTACAGGGTTCTTATTTTCAGTGGAGACCATGATATGTGCGTACCATTCACTGGGAGTGAGGCATGGACTCGATCTCTTGGATATAAGATTGTTGATGAATGGAGGCCCTGGACTACCAATCTCCAAGTTTCTGGCTACTTACAGCAATACCAAAACAACCTCACCTTCCTCACCGTCAAGGGAGCAGGACACACTGTGCCAGAATACAAGCCCCGGGAGGCACTGCAATTCTACACTCGTTGGTTGCAAGAAAAGTCGATATGA 1623 0.451 MLMYRRLLCVLEYSFDMLTLTSRFIIYMEEGDEGEHQLRSWVKQRLGMEKNMLVGLVWMLILCSVEGRGSVITELPGFEGRLPSKQYGGYITIDGDKNLYYYFVTSQTNPHSDPLVLWLNGGPGCSSFDGFVYEHGPFNFEAPKTNGSLPTLHLNPYSWSKVSNIIYLDSPVGVGLSYSTNSSKYDTGDLQTASDTHAFLLKWFEQFPEFLANPFYVSGESYAGVYVPTLAYQIVQGLKSGTKPVINFKGYMIGNGVTDEIFDGNALIPFVHGMGLISDNIYEDVETACKGNYYNPDDAFEDKACSKNLNKVYRAVDVLNVYNILEPCYHEPSNSGNTSLPIPQSFQQLGFKDTEKPLRVRKRIFGRAWPLRAPAKNGVVSLWPQILAQNKMNVMCVNDEVASSWLNNEAVRKAIHAEQEGVAGAWELCTERISYTQDAGSMIPYHKNLTMQGYRVLIFSGDHDMCVPFTGSEAWTRSLGYKIVDEWRPWTTNLQVSGYLQQYQNNLTFLTVKGAGHTVPEYKPREALQFYTRWLQEKSI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1614 540 Gene3D alpha/beta hydrolase 67 369 IPR029058 -
Bisa03g1614 540 ProSitePatterns Serine carboxypeptidases, serine active site. 217 224 IPR018202 GO:0004185
Bisa03g1614 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 203 228 IPR001563 GO:0004185|GO:0006508
Bisa03g1614 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Bisa03g1614 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 507 520 IPR001563 GO:0004185|GO:0006508
Bisa03g1614 540 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Bisa03g1614 540 Pfam Serine carboxypeptidase 76 536 IPR001563 GO:0004185|GO:0006508
Bisa03g1614 540 SUPERFAMILY alpha/beta-Hydrolases 72 538 IPR029058 -
Bisa03g1614 540 Gene3D - 392 539 - -
Bisa03g1614 540 FunFam Carboxypeptidase 442 537 - -
Bisa03g1614 540 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 73 524 IPR001563 GO:0004185|GO:0006508
Bisa03g1614 540 FunFam Carboxypeptidase 66 349 - -
Bisa03g1614 540 FunFam Carboxypeptidase 395 539 - -
Bisa03g1614 540 ProSitePatterns Serine carboxypeptidases, histidine active site. 507 524 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1614 Bisa-ChrBisa03 21776845 21781405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1614 401 535 Calmodulin-binding Proteins AT2G22960 49.630 7.43e-42 146