Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1608 ATGATTGGCAGCAAAGTGTTTCAGACATACAAAAGAAAGCGGAAATCACTGAGGAATAATTTTGAGCATGGTAATTGGTGCCATAATTCATTTTCTGATGACCTATATAATACTACTTTGGCTACACCAGATAAACATGACAAACTAACTACTGCAAAGGCATCAGAAAAGCTGGAGGAAAACTCAACGGTACATCTTGGATGTGTTCCATGTGAGGATACTGCTAAGAGGGATTCTGATAAACTACCTTCAGTAGAAATATCTTCTCGGAATGGGCGTGACAGTCAGAGAAATTCCAGTTCAATTGAAAGCTTTGATAATGATCAAAAATTCATTTCCCCATTGGTGGAATTGGATGGTGGGAATGCTTGCAATTTAGTCAGTTCAGAAGCATCCCATGCTGGGAAATTCAGCTCTGCATGTGATGATGGCTGTCCTATTTTGAAGAAGTCAATGGAAGAATTTGTGGAGATTTTCTCCAAAGATAAGTTTAGTAACTTATCTGGTTTCAGTCGATGTTATAAAAGGAAAAAGCGATTGGATGGGACAGATACACAGAGCAAGTTGTTGCAAGAGAAGGAAAATAATTCGTTGCTGATCAAGCAGAGCATACTCACAAATGTTAATGCCTGTTCTTGCAATGAAACAACTTGTAAGAGATGTTCTGTAGATAATGTAACCATCCTGGAGCAATCTGCAGAGCTTTCAGGAAGGGGGAAGTTATCATCCAATCATATGCAAGATCAAACAAGCTGCTCTATGGATAATTTAACAGATCTCAATCAATCGGCAGAGCTATTTGAAAGAGAAAAGCTGTATCAAACTTGTGAAAAAGTGAAAAATACCAACTCTCTCAGTGCTTCTGGTGGAACTGCTTCTGAAACCAGTTTGAGACACGTGAGTGAATTACTGCATCATGGGGAAGTCCTAACAAAGGCTGTCTCTCCTAGAACTGGTCAAGAAGTGTCAAACCGGTGTTTGCAGATTGATGAGGAGGCCAAGCATCATCTTAAAGATTGTCATAGAGCCTCCTTCAGTGTTGAGTTTATAGATCTTTTTCCTGCAACAACTGCTGCTGATGTGGAACCAGAAAAGTCCCAGCGCAATGTAAAACATGCCTCCCAAAATTTTCTCTTCAGTTGCTTGGAGAAAACCACCGGACAGAAACATCATGATGACCTGTCTGTTATTCCTGCAGAAAAGCAGTGTGTTGATTTGGACTTAGGTGCTGACAAGCATCCGATTCATCCAAGAATCAGAACTGTGAGGAATTCACTGGACTCTAGAAGCATTAGTTCTGCCATTGCTGATCAGCTAATTTCAGAAGAAAATGCAAGCAGTTGCCTTTTCTCAGGGACTGCACAACCTGAATCAGATACTTGCCAGATGTCAGATGAAAGAAAGAATTTTCAACAAATAGAAAATTATCAACCAAAACATATGCCAAGCAGTTCTCTCTCTTTGAGTTTATCGTTACCCATGGATTTTAAGATTGGAAGCTGTGATGCCATTAATTGCTTCTCAGTATTACCCGTGTCAAATTCTACAACTGAAACTCGAGAATTTTTCCAGGATGGATTAAGCCAATCTTCATCAAACCAGAGACCACTGCTTCTCAGACACAAAATAATGCTTGACAACATTGTAAACAGAGCAAGAGCTTTGAATGAAAGAGGGAATTTTCTAGAAAAATTCAAGCCTCATCCTATCACGTGGTCTGAAGAGGAGTTGGATTATCTTTGGATTGGTGTAAGGAGACATGGTAGGGGCAATTGGGATGCTATTCTAAGAGATCCAAGACTGCAGTTTTCACCACTTAGGGTACCAATAGACCTGGCTGAGCGGTGGGAGGAGGAACAACTAAAACTTCTAAATGACATTGGCGTTCCACAATTCAAGTGTTCAAAATCGGAGAATTTATTTTTGGAAGGAAATTGTTGCTTCTTGGACCCTAAAGCAGCAGGTTTACGGAGAGAAAATAGAATTGATGACACCCAGCTGTCCCTTGGAGATGCATATGCTCAAAGGGAGAGTAACCTCTTGAAGAAACCTCGTGTGAGGTTTAATCTTCAAAGTAATGCCAGTGTACACAGCCGTAGGCCTACTACTAGTAGTAGTAATTCCACGAGTGCCTTCTATGACAATAATACAGATAAATATCACTGGGAATTATTCAATTCTCCAGGAACCTTGAGGATCCCCAAGGGAAACTCTAATGCAAACGATCTTCCCTTCACATGTTTGGGTGCAACGAACAATCTACCCCACTGGCTCAGGGAAGCAGTTAGCAGTAGCACAGCCCCTCCAGCAGTTTTTAGTTCACATTCAGATATGCTGGGATCCTCAGAACGTTGCTTCAATATTAGTAAGTCGTGCTTGGTGTCACAAAATAGATGGAGTGTCTCCAGGACAAATGATAAAGAGCTACACTTGCCAAACGCTCCTCGCTACTCAACCTACTCCAGAAGAAAACAGGGGCTGGAGAAGAACAGGTCCCCGGAGCATTATGCTAAGAAACCAGATGACTTGATCATCATTGATAGTGACGTATCTTCTGAAGAGACCATATCTGATGATCATGGTGCCAGGTTGTAG 2595 0.4116 MIGSKVFQTYKRKRKSLRNNFEHGNWCHNSFSDDLYNTTLATPDKHDKLTTAKASEKLEENSTVHLGCVPCEDTAKRDSDKLPSVEISSRNGRDSQRNSSSIESFDNDQKFISPLVELDGGNACNLVSSEASHAGKFSSACDDGCPILKKSMEEFVEIFSKDKFSNLSGFSRCYKRKKRLDGTDTQSKLLQEKENNSLLIKQSILTNVNACSCNETTCKRCSVDNVTILEQSAELSGRGKLSSNHMQDQTSCSMDNLTDLNQSAELFEREKLYQTCEKVKNTNSLSASGGTASETSLRHVSELLHHGEVLTKAVSPRTGQEVSNRCLQIDEEAKHHLKDCHRASFSVEFIDLFPATTAADVEPEKSQRNVKHASQNFLFSCLEKTTGQKHHDDLSVIPAEKQCVDLDLGADKHPIHPRIRTVRNSLDSRSISSAIADQLISEENASSCLFSGTAQPESDTCQMSDERKNFQQIENYQPKHMPSSSLSLSLSLPMDFKIGSCDAINCFSVLPVSNSTTETREFFQDGLSQSSSNQRPLLLRHKIMLDNIVNRARALNERGNFLEKFKPHPITWSEEELDYLWIGVRRHGRGNWDAILRDPRLQFSPLRVPIDLAERWEEEQLKLLNDIGVPQFKCSKSENLFLEGNCCFLDPKAAGLRRENRIDDTQLSLGDAYAQRESNLLKKPRVRFNLQSNASVHSRRPTTSSSNSTSAFYDNNTDKYHWELFNSPGTLRIPKGNSNANDLPFTCLGATNNLPHWLREAVSSSTAPPAVFSSHSDMLGSSERCFNISKSCLVSQNRWSVSRTNDKELHLPNAPRYSTYSRRKQGLEKNRSPEHYAKKPDDLIIIDSDVSSEETISDDHGARL 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1608 864 Gene3D - 571 620 - -
Bisa03g1608 864 SUPERFAMILY Homeodomain-like 569 618 IPR009057 -
Bisa03g1608 864 MobiDBLite consensus disorder prediction 85 104 - -
Bisa03g1608 864 CDD SANT_TRF 572 616 - -
Bisa03g1608 864 MobiDBLite consensus disorder prediction 692 711 - -
Bisa03g1608 864 ProSiteProfiles Myb-like domain profile. 572 620 IPR001005 -
Bisa03g1608 864 MobiDBLite consensus disorder prediction 806 836 - -
Bisa03g1608 864 MobiDBLite consensus disorder prediction 822 836 - -
Bisa03g1608 864 MobiDBLite consensus disorder prediction 74 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1608 Bisa-ChrBisa03 21716565 21722515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1608 570 616 Single Myb Histone (SMH) Gene Family AT1G17520 48.980 2.19e-06 48.5