Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1587 ATGGGATTGATCGTGGAGGAGGAAGGAGACCGCCAGATTCTGCTTCCGCCGCCCAATTTCTCAATGGTGGAGGACAACATTTTCCGATCCAGCTTCCCTCGACCTTCCAATTTTCCCTTCCTTCAAACCCTAAATATTCGATCCATCATATACTTGTGTCCCGAGCCATATCCGCAAGAAAATTTGGAGTTCCTTCGGTCACAGAATATTCGGCTCTTCCAGTTTGGAATTGAGGGAAAGACGGAGCTTTCTTTACCTATTCTCAAGGATACTATGATGGAGTCTCTGAAAGTTTTAATTGATGTGAGAAACCACCCTGTTTTGATCCATTGCAAACAAGGAAAGCACCGAACTGGTTGCCTTGTTGGTTGCTTGAGAAAATTGCAGAACTGGTGTTTGTCTTCTGTTTTTGAGGAATACAAGAGATTTGCTGGTGCTAAATCTAGGATAGCGGATTTAAAATTCATAGAATCATTTGACATCTTTCCCCTCAAGCAGTGCCTTTACAGCATCATATACCAGTACCAAGGATATAATTCGAAGAAGAGACGGTTGTTGTATAAAGAAGAGAATTTACAGAAGCCGCAAATAACATCAGTTTAG 603 0.4196 MGLIVEEEGDRQILLPPPNFSMVEDNIFRSSFPRPSNFPFLQTLNIRSIIYLCPEPYPQENLEFLRSQNIRLFQFGIEGKTELSLPILKDTMMESLKVLIDVRNHPVLIHCKQGKHRTGCLVGCLRKLQNWCLSSVFEEYKRFAGAKSRIADLKFIESFDIFPLKQCLYSIIYQYQGYNSKKRRLLYKEENLQKPQITSV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1587 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 19 168 IPR020422 GO:0006470|GO:0008138
Bisa03g1587 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 109 119 IPR016130 GO:0016311|GO:0016791
Bisa03g1587 200 PRINTS Plant and fungal dual specificity phosphatase signature 70 84 IPR020428 GO:0016791
Bisa03g1587 200 PRINTS Plant and fungal dual specificity phosphatase signature 14 31 IPR020428 GO:0016791
Bisa03g1587 200 PRINTS Plant and fungal dual specificity phosphatase signature 51 64 IPR020428 GO:0016791
Bisa03g1587 200 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Bisa03g1587 200 Gene3D Protein tyrosine phosphatase superfamily 13 162 IPR029021 -
Bisa03g1587 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 157 IPR029021 -
Bisa03g1587 200 FunFam probable tyrosine-protein phosphatase At1g05000 13 163 - -
Bisa03g1587 200 Pfam Tyrosine phosphatase family 14 162 IPR004861 -
Bisa03g1587 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 13 170 - -
Bisa03g1587 200 CDD PFA-DSP_Siw14 14 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1587 Bisa-ChrBisa03 21478472 21480267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1587 1 196 Protein tyrosine phosphatase (PTP) family AT3G02800 66.497 5.71e-99 283