LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa03g1584	ATGGGAGACAACGGCAATAATGACAACAATGATAGTAATCATCTTCAAGTTCTGATTTCGGACTCCGAAATGGGAGAAGGCGCGGGGTTCCAGGGGTTTTGTGAAACGGTGGGTAAACGGAGCATCGCAGAGAGAAGGGGATTCAGTTCAGATGCAGCCCGGATCAATACGGCTCGCTTTCGCACCACAAGCCCATTGGCTTCTCCCGCAGCTCGTTCACCCTGTCTCACTATACCCCCTGGTATCAGCCCCACCGCCTTGCTCGACTCTCCTGTCATGCTTCCTAATTCTCAGGCCATGCCATCTCCCACCACTGGAACTTTTATGCTGCCTCCTCTCAGTCATGAAGGATCAATTCTGACTTCTGTCACTCGTGATGAAGGGGACGCCGGCACTGGGAGTGATGCTGCTTCGTCTTTCAAATTCAAGCCCCGGCCTAATCCTAATCCTCCACCTGTCTCCACTGTTCTTGAAAATCCGGTTTATAATCATTGTTCCATGACAAATGGAGGAATTTCTGACTGCCAGCCAATTGTGCCTGTTCAACCACCATTAGATTTTGCCATTCCAGCAGAGTTTCCAAAAGGACATACGACAAAAAATGAAGTTCATTCATATGATGATGTGAAAATGATACATGATGCAATTTCTAATGCTAACGATGTTGAGATGCAAATGCATCATTCCGAGGAAGCTAGTGATGAAAGCTCTCAAGCTAAAAAGGCTAACAAGGATATAGGACAGCAACATCTTTTAGAAGGAGACAAGAGAGAGACATCCCATTCCATGGGAATGGTGAGGACCTCAGAGGATGGATACAACTGGAGGAAATATGGACAGAAGCAGGTAAAAGGTAGTGAATATCCAAGGAGCTATTATAAATGTACCCATCCTAGTTGTCCAGTCAAGAAAAAGGTGGAACGATCCCTTGATGGCCAAATAACTGAAATTATCTACAAGGGTACTCATAATCATGGAAAACCAAATCCTAGTCGCCGAGCATCACTGGGATCAGCACTTTCTACTGATGAGATGTCAGACATGGGTGAAGGTGGTGGAACCTGTGTTAAAGTTGATGGCAGTTCGATTTGGAGAAATATTCAGTCAGGAATGAAGGATATGAAGCACAATTTGGATTGGAAGGCTGATAATCAGGAAAGGACATCCTCAACTTCCGTTGTAACTGAACTCTCAGATCCCATATCATTTAACAAAGGGAAACCTATCTGTATGTTTGAGCCAGAGGACAATCCAGAGCTTTCTTCTACACTTGCTAGTCAAGATGATGATGAAGATGGAGCAACTCAAGGAAGCATATCTATTGAGGAGGATGCAGATGATGAAGAATCTGATTCAAAAAGAAGGAAGAAAGAGAGCTGCTCGATTGAATCAAATTTTGCTTCTAGGGCTGTACGTGAGCCAAGGGTTGTAGTCCAAATTGAGAGTGAAGTGGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAAGTTGTCAAAGGAAATCCAAACCCTAGGAGCTACTACAAATGCACAAGCGCTGGATGTTCCGTAAGGAAACATGTGGAGAGGGCTTCACACGATCTAAAATTTGTAATTACTACTTATGAGGGAAAACATAACCATGAAGTGCCCACCGCTAGAAGCAACAATCAGGCGGGCTCAAGTGGTACTTGTGTACTTCCAAGTGCTGCTAATGCACAAGTGGCTCTTACATTACCGCGGAATGTCACTATTCCAAAGCCAGAAACTCAAGTTGAAAACGTTGCGCCTCATTTTGATAGAAAACCTGAATTTAGCACTGAGTTTTTAAGGCCCGGTTTTGTTGGAAGCTTCGGTGATGATATGAAATTTGGGTCTACCTCCATGTGCCAGATGAAGTATTCTCCCTTGAGTAATACGTTGCCTTATGGCTCTTATGAGCTGAATCCTGACCGTTGTGCTCCTCTTCGAGCGGGCTCTATTGCCTCGGTGTTCCCTGACTTCCCAGTGTCACTACCGTTGAATCTTCCTTCGTCTGGAAATTATCCTCTGGCCGGATTTAATTATAACTGTGTAAAACCGATGGGTCCAATCCAGTCTTATCTTTCTGGGCAGCAGCTGAAGGAGGTTGATTCAGGTTTCCTGAGGCCTAAACAGGAGCAGAAGGATAATATTATGTATGATACATGCGTACCCATTGTTAAACATGCCAGTTCTTCACTCACTTCATCATCAGCATCATCATCGGTGTATCACCGGGTCAAGCAAAATTTTCCTTCATAG	2271	0.4452	MGDNGNNDNNDSNHLQVLISDSEMGEGAGFQGFCETVGKRSIAERRGFSSDAARINTARFRTTSPLASPAARSPCLTIPPGISPTALLDSPVMLPNSQAMPSPTTGTFMLPPLSHEGSILTSVTRDEGDAGTGSDAASSFKFKPRPNPNPPPVSTVLENPVYNHCSMTNGGISDCQPIVPVQPPLDFAIPAEFPKGHTTKNEVHSYDDVKMIHDAISNANDVEMQMHHSEEASDESSQAKKANKDIGQQHLLEGDKRETSHSMGMVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPSCPVKKKVERSLDGQITEIIYKGTHNHGKPNPSRRASLGSALSTDEMSDMGEGGGTCVKVDGSSIWRNIQSGMKDMKHNLDWKADNQERTSSTSVVTELSDPISFNKGKPICMFEPEDNPELSSTLASQDDDEDGATQGSISIEEDADDEESDSKRRKKESCSIESNFASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKFVITTYEGKHNHEVPTARSNNQAGSSGTCVLPSAANAQVALTLPRNVTIPKPETQVENVAPHFDRKPEFSTEFLRPGFVGSFGDDMKFGSTSMCQMKYSPLSNTLPYGSYELNPDRCAPLRAGSIASVFPDFPVSLPLNLPSSGNYPLAGFNYNCVKPMGPIQSYLSGQQLKEVDSGFLRPKQEQKDNIMYDTCVPIVKHASSSLTSSSASSSVYHRVKQNFPS	756

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa03g1584	756	SUPERFAMILY	WRKY DNA-binding domain	480	547	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	Gene3D	WRKY domain	474	540	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	SUPERFAMILY	WRKY DNA-binding domain	266	328	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	ProSiteProfiles	WRKY domain profile.	264	328	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	MobiDBLite	consensus disorder prediction	328	342	-	-
	Bisa03g1584	756	FunFam	WRKY transcription factor	257	329	-	-
	Bisa03g1584	756	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	89	565	IPR044810	GO:0003700
	Bisa03g1584	756	MobiDBLite	consensus disorder prediction	448	462	-	-
	Bisa03g1584	756	FunFam	WRKY transcription factor 33	474	540	-	-
	Bisa03g1584	756	MobiDBLite	consensus disorder prediction	408	463	-	-
	Bisa03g1584	756	MobiDBLite	consensus disorder prediction	419	434	-	-
	Bisa03g1584	756	Gene3D	WRKY domain	257	329	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	MobiDBLite	consensus disorder prediction	321	349	-	-
	Bisa03g1584	756	SMART	WRKY_cls	269	327	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	SMART	WRKY_cls	487	546	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	ProSiteProfiles	WRKY domain profile.	482	547	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	MobiDBLite	consensus disorder prediction	124	153	-	-
	Bisa03g1584	756	Pfam	WRKY DNA -binding domain	488	545	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa03g1584	756	Pfam	WRKY DNA -binding domain	270	325	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa03g1584	Bisa-ChrBisa03	21448251	21453443	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa03g1584	42	550	WRKY Transcription Factor Family	AT5G56270	40.114	4.08e-102	327

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa03g1584		WRKY	1.4e-24	CL0274