Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa03g1564 ATGATTTCACAGTGGTGTAAGGAGAATGAAGTTGAGCTACCAAAGCCTGTTCGGGACAGTGATGAAGTAATAACTGATGCAGATAAGAGCCATTTAAGTTCGTTGCTTAACAAGTTGTCAATGTCTATTTCTGATCAGAAAGAAGCTGCAAAAGAGCTTCGGCTGTTGACAAAACGAATGCCCTCATTTCGAATCCTTTTTAGGGAGTCCAGTGATGTGATTTTACAGTTGCTTAGTCCATTATCACCTGGTACGGCTTCTACCCATCCTGATCTTCATGAGGACTTGATCACAATTGTTCTAAATCTCTCCATTCATGATGATAATAAGAAAATGTTTGCTGAGAATCCAATGGTTATCCCCCTGCTAATTGATGCCTTAAAATCTGGAACCATTCAAACCAGAAGTAATGCTGCTGCAGCTATTTTCACATTATCAGCGCTTGATTCCAACAAGAGCATCATTGGAGAATCTGGAGCTATTAAACATTTGGTTGAGCTTTTAGAGGAGGGGCATCCACTAGCCATGAAAGATGCTGCCTCTGCCATATTCAACCTATGTCTTGTGCATGAAAATAAAGGAAGGACTGTCCGAGAAGGGGCAGTCCGGGTTATTTTGAGCAAAATCATGGACCACATTCTAGTTGATGAGTTGTTGGCTATTTTGGCACTCCTGTCTTGCCATCCCAAGGCTGTCGAAGAAATGGGTGATCTCGGTGCTGTCCCCTTGTTGCTCGGTATTATAAGGGAGGGCACCTCGGAACGCAGCAAGGAAAATTGTGTGGCAATCCTACATACAATCTGTTTCAATGATAGAACAAAATGGAAGGAAATTAAAGAAGAAGAAAAAGCCAATGGCACACTGTCTGAACTTGCACGATGTGGGACTTCAAGGGCCAAAAGGAAGGCTAATGGGATTCTTGAGAGGCTTCACAGATCTCCCACCTTAACGCACACGGCGTAG 963 0.4309 MISQWCKENEVELPKPVRDSDEVITDADKSHLSSLLNKLSMSISDQKEAAKELRLLTKRMPSFRILFRESSDVILQLLSPLSPGTASTHPDLHEDLITIVLNLSIHDDNKKMFAENPMVIPLLIDALKSGTIQTRSNAAAAIFTLSALDSNKSIIGESGAIKHLVELLEEGHPLAMKDAASAIFNLCLVHENKGRTVREGAVRVILSKIMDHILVDELLAILALLSCHPKAVEEMGDLGAVPLLLGIIREGTSERSKENCVAILHTICFNDRTKWKEIKEEEKANGTLSELARCGTSRAKRKANGILERLHRSPTLTHTA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa03g1564 320 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 159 201 IPR000225 GO:0005515
Bisa03g1564 320 PANTHER U BOX DOMAIN-CONTAINING 1 310 - -
Bisa03g1564 320 Gene3D - 67 212 IPR011989 -
Bisa03g1564 320 SMART arm_5 148 188 IPR000225 GO:0005515
Bisa03g1564 320 SMART arm_5 228 269 IPR000225 GO:0005515
Bisa03g1564 320 SMART arm_5 106 147 IPR000225 GO:0005515
Bisa03g1564 320 FunFam RING-type E3 ubiquitin transferase 22 315 - -
Bisa03g1564 320 Gene3D - 213 315 IPR011989 -
Bisa03g1564 320 Pfam Armadillo/beta-catenin-like repeat 151 187 IPR000225 GO:0005515
Bisa03g1564 320 SUPERFAMILY ARM repeat 32 313 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa03g1564 Bisa-ChrBisa03 21209786 21210748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa03g1564 1 320 U-box Gene Family AT3G07360 60.366 7.18e-132 376